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SWFSC Fisheries Ecology Publication Search Result

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No.	Citation	Additional Material
1119	Beakes, M.P., J.W. Moore, N. Retford, R. Brown, J.E. Merz, and S.M. Sogard. In press. Evaluating statistical approaches to quantifying juvenile Chinook salmon habitat in a regulated California river. River Research and Applications.
1246	Field, John C., Carl Elliger, Ken Baltz, Graham E. Gillespie, William F. Gilly, R.I. Ruiz-Cooley, Devon Pearse, Julia S. Stewart, William Matsubu, and William Walker. In press. Foraging ecology and movement patterns of jumbo squid (Dosidicus gigas) in the California Current system. Deep Sea Research II.
1265	Frechette, D.M., Alison L. Collins, J.T. Harvey, S.A. Hayes, D.D. Huff, A.W. Jones, A.E. Langford, J.W. Moore, A.K. Osterback, N.A. Retford, W.H. Satterthwaite, and S.A. Shaffer. In press. A bioenergetics approach to assessing potential impacts of avian predation on juvenile steelhead (Oncorhynchus mykiss) during freshwater rearing. North American Journal of Fisheries Management.
1232	Glaser, Sarah M., Michael J. Fogarty, Hui Liu, Irit Altman, Chih-Hao Hsieh, Les Kaufman, Alec D. MacCall, Andrew A. Rosenberg, Hao Ye, and George Sugihara. In press. Complex dynamics may limit prediction in marine fisheries. Fish and Fisheries.
1121	Hoving, Henk-Jan, William F. Gilly, Unai Markaida, Kelly J. Benoit-Bird, Zachary W. Brown, Patrick Daniel, John C. Field, Liz Parassenti, Bilin Liu, and Bernardita Campos. In press. Extreme plasticity in life-history strategy allows a migratory predator (jumbo squid) to cope with a changing climate. Global Change Biology.
1257	Kaplan, Isaac C., Christopher J. Brown, Elizabeth A. Fulton, Iris A. Gray, John C. Field, and Anthony D.M. Smith. In press. Impacts of depleting forage species in the California Current. Environmental Conservation.
1267	Kinziger, Andrew P., Michael Hellmair, David G. Hankin, and John Carlos Garza. In press. Contemporary population structure in Klamath River basin Chinook salmon revealed by analysis of microsatellite genetic data. Transactions of the American Fisheries Society.
1197	Mangel, Marc, Alec D. MacCall, Jon Brodziak, E.J. Dick, Robyn E. Forrest, Roxanna Pourzand, and Stephen Ralston. In press. A perspective on steepness and its implications for strategic fishery management and stock assessment. Canadian Journal of Fisheries and Aquatic Sciences.
1215	Moyle, P.B., J.D. Kiernan, P.K. Crain, and R.M. Quinones. In press. Climate change vulnerability of native and alien freshwater fishes of California: a systematic assessment approach. PLoS ONE.
695	NOAA National Marine Fisheries Service. In press. Our living oceans: Habitat. The status of habitats of U.S. living marine resources. NOAA Technical Memorandum NMFS-F/SPO-75.
1261	Pritchard, Victoria, and John Carlos Garza. In press. Discovery and characterization of novel genetic markers for coastal cutthroat trout (Oncorhynchus clarkii clarkii). Conservation Genetics Resources.
1254	Ralston, S., K.M. Sakuma, and J.C. Field. In press. Interannual variation in pelagic juvenile rockfish (Sebastes spp.) abundance -- going with the flow. Fisheries Oceanography.
1248	Shelton, Andrew O., William H. Satterthwaite, Michael P. Beakes, Stephen B. Munch, Susan M. Sogard, and Marc Mangel. In press. Separating intrinsic and environmental contributions to growth and their population consequences. American Naturalist.
1240	Stewart, Julia S., John C. Field, Unai Markaida, and William F. Gilly. In press. Behavioral ecology of jumbo squid (Dosidicus gigas) in relation to oxygen minimum zones. Deep Sea Research II.
1241	Stewart, Julia S., William F. Gilly, John C. Field, and John C. Payne. In press. Onshore–offshore movement of jumbo squid (Dosidicus gigas) on the continental shelf. Deep Sea Research II.
1256	Sugeno, Masatoshi, and Stephan B. Munch. In press. A semiparametric Bayesian approach to estimating maximum reproductive rates at low population sizes. Ecological Applications.
1255	Sugeno, Masatoshi, and Stephan B. Munch. In press. A semiparametric Bayesian method for detecting Allee effects. Ecology.
1037	Woodson, Lindsay E., Brian K. Wells, Peter K. Weber, R. Bruce MacFarlane, George E. Whitman, and Rachel C. Johnson. In press. Size, growth and origin-dependent mortality of juvenile Chinook salmon Oncorhynchus tshawytscha during early ocean residence. Marine Ecology Progress Series.
1226	Zabin, Chela J., Eric M. Danner, Erin P. Baumgartner, David Spafford, Kathy Ann Miller, and John S. Pearse. In press. A comparison of intertidal species richness and composition between central California and Oahu, Hawaii. Marine Ecology.
1251	Ackiss, Amanda S., Shinta Pardede, Eric D. Crandall, Ma. Carmen A. Ablan-Lagman, Ambariyanto, November Romena, Paul H. Barber, and Kent E. Carpenter. 2013. Pronounced genetic structure in a highly mobile coral reef fish, Caesio cuning, in the Coral Triangle. Marine Ecology Progress Series 480:185-197.
1114	Ammann, Arnold J., Cyril J. Michel, and R. Bruce MacFarlane. 2013. The effects of surgically implanted acoustic transmitters on laboratory growth, survival and tag retention in hatchery yearling Chinook salmon. Environmental Biology of Fishes 96(2-3)135-143.
1157	Chapman, Eric D., Alex R. Hearn, Cyril J. Michel, Arnold J. Ammann, Steven T. Lindley, Michael J. Thomas, Philip T. Sandstrom, Gabriel P. Singer, Matthew L. Peterson, R. Bruce MacFarlane, and A. Peter Klimley. 2013. Diel movements of out-migrating Chinook salmon (Oncorhynchus tshawytscha) and steelhead trout (Oncorhynchus mykiss) smolts in the Sacramento/San Joaquin watershed. Environmental Biology of Fishes 96(2-3):273-286.
1224	Conrad, J. Louise, Elizabeth A. Gilbert-Horvath, and John Carlos Garza. 2013. Genetic and phenotypic effects on reproductive outcomes for captively-reared coho salmon, Oncorhynchus kisutch. Aquaculture 404-405:95-104.
702	Deyle, Ethan R., Michael Fogarty, Chih-hao Hsieh, Les Kaufman, Alec D. MacCall, Stephan B. Munch, Charles T. Perretti, Hao Ye, and George Sugihara. 2013. Predicting climate effects on Pacific sardine. Proceedings of the National Academy of Sciences of the United States of America 110(16):6430-6435.
1227	Garwood, Rebecca S., Timothy J. Mulligan, and Eric P. Bjorkstedt. 2013. Ichthyological assemblage and variation in a Northern California Zostera marine eelgrass bed. Northwestern Naturalist 94(1):35-50.
1243	Haltuch, Melissa A., Owen S. Hamel, Kevin R. Piner, Patrick McDonald, Craig R. Kastelle, and John C. Field. 2013. A California Current bomb radiocarbon reference chronology and petrale sole (Eopsetta jordani) age validation. Canadian Journal of Fisheries and Aquatic Sciences 70(1):22-31.
957	Hayes, Sean A., Nicole M. Teutschel, Cyril J. Michel, Cory Champagne, Patrick W. Robinson, Melinda Fowler, Tina Yack, David K. Mellinger, Samantha Simmons, Daniel P. Costa, and R. Bruce MacFarlane. 2013. Mobile receivers: releasing the mooring to 'see' where fish go. Environmental Biology of Fishes 96(2-3):189-201.
961	Laidig, Thomas E., Lisa M. Krigsman, and Mary M. Yoklavich. 2013. Reactions of fishes to two underwater survey tools, a manned submersible and a remotely operated vehicle. Fishery Bulletin 111(1):54-67.
1077	MacCall, Alec D. 2013. Use of the delta method to evaluate the precision of assessments that fix parameter values. Fisheries Research 142:56-60.
1228	MacCall, Alec D., and Steven L.H. Teo. 2013. A hybrid stock synthesis - Virtual population analysis model of Pacific bluefin tuna. Fisheries Research 142:22-26.
1212	Mamula, Aaron, and John Walden (eds.). 2013. Proceedings of the National Marine Fisheries Service Productivity Workshop (Santa Cruz, CA June 11-12, 2012). NOAA Technical Memorandum NMFS-SWFSC-503. 52 p.
952	Michel, Cyril J., Arnold J. Ammann, Eric D. Chapman, Philip T. Sandstrom, Heidi E. Fish, Michael J. Thomas, Gabriel P. Singer, Steven T. Lindley, A. Peter Klimley, and R. Bruce MacFarlane. 2013. The effects of environmental factors on the migratory movement patterns of Sacramento River yearling late-fall run Chinook salmon (Oncorhynchus tshawytscha). Environmental Biology of Fishes 96(2-3):257-271.
1211	Moran, Paul, David J. Teel, Michael A. Banks, Terry D. Beacham, M. Renee Bellinger, Scott M. Blankenship, John R. Candy, John Carlos Garza, Jon E. Hess, Shawn R. Narum, Lisa W. Seeb, William D. Templin, Colin G. Wallace, and Christian T. Smith. 2013. Divergent life-history races do not represent Chinook salmon coast-wide: the importance of scale in Quaternary biogeography. Canadian Journal of Fisheries and Aquatic Sciences 70(3):415-435.
1266	Perretti, Charles T., George Sugihara, and Stephan B. Munch. 2013. Nonparametric forecasting outperforms parametric methods for a simulated multispecies system. Ecology 94(4):794-800.
1158	Perretti, Charles T., Stephan B. Munch, and George Sugihara. 2013. Model-free forecasting outperforms the correct mechanistic model for simulated and experimental data. Proceedings of the National Academy of Sciences of the United States of America 110(13):5253-5257.
1245	Pritchard, Victoria L., Nathan R. Campbell, Shawn R. Narum, Mary M. Peacock, and John Carlos Garza. 2013. Discovery and characterization of novel genetic markers for use in the management of Lahontan cutthroat trout (Oncorhynchus clarkii henshawi). Molecular Ecology Resources 13(2):276-288.
1221	Ruegg, Kristen, Howard C. Rosenbaum, Eric C. Anderson, Marcia Engel, Anna Rothschild, C. Scott Baker, and Stephen R. Palumbi. 2013. Long-term population size of the North Atlantic humpback whale within the context of worldwide population structure. Conservation Genetics 14(1):103-114.
1264	Santora, Jarrod A., William J. Sydeman, Monique Messie, Fei Chai, Yi Chao, Sarah Ann Thompson, Brian K. Wells, and Francisco P. Chavez. 2013. Triple check: Observations verify structural realism of an ocean ecosystem model. Geophysical Research Letters 40(7):1367-1372.
1260	Satterthwaite, William H., Michael S. Mohr, Michael R. O'Farrell, and Brian K. Wells. 2013. A comparison of temporal patterns in the ocean spatial distribution of California's Central Valley Chinook salmon runs. Canadian Journal of Fisheries and Aquatic Sciences 70(4):574-584.
1085	Schroeder, Isaac D., Bryan A. Black, William J. Sydeman, Steven J. Bograd, Elliott L. Hazen, Jarrod A. Santora, and Brian K. Wells. 2013. The North Pacific High and wintertime pre-conditioning of California current productivity. Geophysical Research Letters 40(3):541-546.
1259	Williams, Thomas H., John Carlos Garza, Nicholas J. Hetrick, Steven T. Lindley, Michael S. Mohr, James M. Myers, Michael R. O'Farrell, Rebecca M. Quinones, and David J. Teel. 2013. Upper Klamath and Trinity River Chinook salmon Biological Review Team report. NOAA Technical Memorandum NMFS-SWFSC-502. 47 p.
1231	Winship, Arliss J., Michael R. O'Farrell, and Michael S. Mohr. 2013. Management strategy evaluation applied to the conservation of an endangered population subject to incidental take. Biological Conservation 158:155-166.
1238	Woodson, Lindsay E., Brian K. Wells, Churchill B. Grimes, Robert P. Franks, Jarrod A. Santora, and Mark H. Carr. 2013. Water and otolith chemistry identify exposure of juvenile rockfish to upwelled waters in an open coastal system. Marine Ecology Progress Series 473:261-273.
1194	Yoklavich, Mary, Tom Laidig, Diana Watters, and Milton Love. 2013. Understanding the capabilities of new technologies and methods to survey west coast groundfishes: Results from a visual survey conducted in 2011 using the Dual Deepworker manned submersible at Footprint and Piggy banks off Southern California. [Final report to NMFS Science Advisor for Stock Assessments.] U.S. National Marine Fisheries Service, Santa Cruz, California. 28 p.
1135	Almudevar, Anthony, and Eric C. Anderson. 2012. A new version of PRT software for sibling groups reconstruction with comments regarding several issues in the sibling reconstruction problem. Molecular Ecology Resources 12(1):164-178.
1222	Anderson, Eric C. 2012. Large-scale parentage inference with SNPs: an efficient algorithm for statistical confidence of parent pair allocations. Statistical Applications in Genetics and Molecular Biology 11(5):article 12 (26 p.).
1195	Barrett, Brian, Rosemary Kosaka, and David Tomberlin. 2012. Road surface erosion on the Jackson Demonstration State Forest: results of a pilot study. In: Proceedings of the Coast Redwood Forests in a Changing California: a symposium for scientists and managers, p. 13-21. U.S. Forest Service, Pacific Southwest Research Station, General Technical Report PSW-GTR-238.
1087	Bjorkstedt, Eric P. 2012. Ricker model. In: Alan Hastings and Louis J. Gross (eds.), Encyclopedia of theoretical ecology, p. 632-636. University of California Press.
1244	Bjorkstedt, Eric P., Ralf Goericke, Sam McClatchie, Ed Weber, William Watson, Nancy Lo, William T. Peterson, Richard D. Brodeur, Toby Auth, Jennifer Fisher, Cheryl Morgan, Jay Peterson, John Largier, Steven J. Bograd, Reginaldo Durazo, Gilberto Gaxiola-Castro, Bertha Lavaniegos, Francisco P. Chavez, Curtis A. Collins, Bob Hannah, John Field, Keith Sakuma, Will Satterthwaite, Michael O'Farrell, Sean Hayes, Jeff Harding, William J. Sydeman, Sarah Ann Thompson, Pete Warzybok, Russell Bradley, Jaime Jahncke, Richard T. Golightly, Stephanie R. Schneider, Robert M. Suryan, Amanda J. Gladics, Cheryl A. Horton, Sung Yong Kim, Sharon R. Melin, Robert L. DeLong, and Jeffrey Abell. 2012. State of the California Current 2011-2012: Ecosystems respond to local forcing as La Nina wavers and wanes. CalCOFI Reports 53:41-76.
1262	Blackhart, Kristan, Stephen K. Brown, Bryant Chesney, E.J. Dick, Kirsten Larsen, Michael O'Farrell, Korie Schaeffer, Brian Spence, Kevin Stierhoff, Dale Sweetnam, and Mary Yoklavich. 2012. Regional habitat assessment prioritization for California stocks. Report of the Southwest Regional Habitat Assessment Prioritization Working Group. U.S. NOAA National Marine Fisheries Service. 36 p.
1133	Boughton, David A., Christine Hatch, and Ethan Mora. 2012. Identifying distinct thermal components of a creek. Water Resources Research 48: W09506 (13 p.).
1250	Butler, John L., Milton S. Love, and Tom E. Laidig. 2012. A guide to the rockfishes, thornyheads, and scorpionfishes of the northeast Pacific. University of California Press. 185 p.
1067	California Hatchery Scientific Review Group. 2012. California Hatchery Review Report. Prepared for the U.S. Fish and Wildlife Service and Pacific States Marine Fisheries Commission. 102 p. Appendices available at http://cahatcheryreview.com/reports/	Appendices and hatchery program reports
1229	Campbell, N.R., S.J. Amish, V.L. Pritchard, K.S. McKelvey, M.K. Young, M.K. Schwartz, J.C. Garza, G. Luikart, and S.R. Narum. 2012. Development and evaluation of 200 novel SNP assays for population genetic studies of westslope cutthroat trout and genetic identification of related taxa. Molecular Ecology Resources 12(5):942-949.
1225	Danner, Eric M., Forrest S. Melton, Andrew Pike, Hirofumi Hashimoto, Andrew Michaelis, Balaji Rajagopalan, Jason Caldwell, Lynn DeWitt, Steven Lindley, and Ramakrishna R. Nemani. 2012. River temperature forecasting: a coupled-modeling framework for management of river habitat. IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing 5(6):1752-1760.
1082	Dick, E.J., Alec MacCall, Braden Soper, and Maria DeYorio. 2012. Exploration of Bayesian stock reduction analysis for assessment of West Coast groundfish. Report submitted to the Review Panel Meeting on Assessment Methods for Data-Moderate Stocks (26-29 June 2012, Seattle, Washington). Pacific Fishery Management Council, Portland, Oregon. 27 p.
1144	Frechette, Danielle, Anne-Marie K. Osterback, Sean A. Hayes, Morgan H. Bond, Jonathan W. Moore, Scott A. Shaffer, and James T. Harvey. 2012. Assessing avian predation on juvenile salmonids using passive integrated transponder tag recoveries and mark-recapture methods. North American Journal of Fisheries Management 32(6):1237-1250.
1137	Gustafson, Richard G., Michael J. Ford, Peter B. Adams, Jonathan S. Drake, Robert L. Emmett, Kurt L. Fresh, Mindy Rowse, Elizabeth A.K. Spangler, Robert E. Spangler, David J. Teel, and Matthew T. Wilson. 2012. Conservation status of eulachon in the California Current. Fish and Fisheries 13(2):121-138.
960	Hayes, Sean A., Chad V. Hanson, Devon E. Pearse, Morgan H. Bond, John Carlos Garza, and R. Bruce MacFarlane. 2012. Should I stay or should I go? The influence of genetic origin on emigration behavior and physiology of resident and anadromous juvenile Oncorhynchus mykiss. North American Journal of Fisheries Management 32(4):772-780.
924	Hayes, Sean A., Morgan H. Bond, Brian K. Wells, Chad V. Hanson, Andrew W. Jones, R. Bruce MacFarlane. 2012. Using archival tags to infer habitat use of Central California steelhead and coho salmon. In: Advances in fish tagging and marking technology. American Fisheries Society Symposium 76:471-492.
1230	Huff, David D., Steven T. Lindley, Brian K. Wells, and Fei Chai. 2012. Green sturgeon distribution in the Pacific Ocean estimated from modeled oceanographic features and migration behavior. PLoS ONE 7(9): e45852 (12 p.).
638	Hurst, Thomas P., Stephan B. Munch, and Kate A. Lavelle. 2012. Thermal reaction norms for growth vary among cohorts of Pacific cod (Gadus macrocephalus). Marine Biology 159(10):2173-2183.
1234	Johnson, Rachel C., Peter K. Weber, John D. Wikert, Michelle L. Workman, R. Bruce MacFarlane, Marty J. Grove, and Alex K. Schmitt. 2012. Managed metapopulations: Do salmon hatchery 'sources' lead to in-river 'sinks' in conservation? PLoS ONE 7(2):e28880 (11 p.).
1140	Kiernan, Joseph D., and Peter B. Moyle. 2012. Flows, droughts, and aliens: factors affecting the fish assemblage in a Sierra Nevada, California, stream. Ecological Applications 22(4):1146-1161.
1141	Kiernan, Joseph D., Peter B. Moyle, and Patrick K. Crain. 2012. Restoring native fish assemblages to a regulated California stream using the natural flow regime concept. Ecological Applications 22(5):1472-1482.
1236	Klamath River Technical Team. 2012. Klamath River fall Chinook salmon age-specific escapement, river harvest, and run size estimates, 2011 run. Klamath River Technical Team. 19 p.
1235	Klamath River Technical Team. 2012. Ocean abundance projections and prospective harvest levels for Klamath River fall Chinook, 2012 season. Klamath River Technical Team. 29 p.
1146	Krigsman, Lisa M., Mary M. Yoklavich, E.J. Dick, and Guy R. Cochrane. 2012. Models and maps: predicting the distribution of corals and other benthic macro-invertebrates in shelf habitats. Ecosphere 3(1):art3 (16 p.).
1209	Link, J.S., T.F. Ihde, C.J. Harvey, S.K. Gaichas, J.C. Field, J.K.T. Brodziak, H.M. Townsend, and R.M. Peterman. 2012. Dealing with uncertainty in ecosystem models: The paradox of use for living marine resource management. Progress in Oceanography 102:102-114.
1247	MacCall, Alec D. 2012. A data-poor assessment of the US wreckfish fishery. Briefing book report to the Scientific and Statistical Committee Meeting, October 23-25, 2012. South Atlantic Fishery Management Council, North Charleston, South Carolina. 10 p.
69	MacCall, Alec D. 2012. Data-limited management reference points to avoid collapse of stocks dependent on learned migration behaviour. ICES Journal of Marine Science 69(2):267-270.
1218	MacCall, Alec D., Kevin T. Hill, Paul Crone, and Robert Emmett. 2012. Weak evidence for sardine collapse. Proceedings of the National Academy of Sciences of the United States of America 109(19):E1131.
1084	MacCall, Alec, E.J. Dick, Braden Soper, and Maria DeYorio. 2012. Sources of abundance information for 65 unassessed stocks of West Coast groundfish. Report submitted to Review Panel Meeting on Assessment Methods for Data-Moderate Stocks (26-29 June 2012, Seattle, Washington). Pacific Fishery Management Council, Portland, Oregon. 63 p.
1216	Mason, Janet, Rosemary Kosaka, Aaron Mamula, and Cameron Speir. 2012. Effort changes around a marine reserve: The case of the California Rockfish Conservation Area. Marine Policy 36(5):1054-1063.
1070	Merz, Joseph E., Paul Skvorc, Susan M. Sogard, Clark Watry, Scott M. Blankenship, and Erwin E. Van Nieuwenhuyse. 2012. Onset of melanophore patterns in the head region of Chinook salmon: a natural marker for the reidentification of individual fish. North American Journal of Fisheries Management 32(4):806-816.
1086	O'Farrell, Michael R., Michael S. Mohr, Allen M. Grover, and William H. Satterthwaite. 2012. Sacramento River winter Chinook cohort reconstruction: analysis of ocean fishery impacts. NOAA Technical Memorandum NMFS-SWFSC-491. 68 p.
1220	O'Farrell, Michael R., Shanae D. Allen, and Michael S. Mohr. 2012. The Winter-Run Harvest Model (WRHM). NOAA Technical Memorandum NMFS-SWFSC-489. 17 p.
1258	O'Farrell, Michael R., William H. Satterthwaite, and Brian C. Spence. 2012. California Coastal Chinook salmon: status, data, and feasibility of alternative fishery management strategies. NOAA Technical Memorandum NMFS-SWFSC-494. 29 p.
898	Pacific Fishery Management Council (Salmon Technical Team). 2012. Preseason report I: Stock abundance analysis and environmental assessment part 1 for 2012 ocean salmon fishery regulations. Regulation Identifier no. 0648-XA921. Pacific Fishery Management Council, Portland, Oregon. 126 p.
954	Pacific Fishery Management Council (Salmon Technical Team). 2012. Preseason report II: Proposed alternatives and environmental assessment part 2 for 2012 ocean salmon fishery regulations. Regulation Identifier no. 0648-XA921. Pacific Fishery Management Council, Portland, Oregon. 69 p.
955	Pacific Fishery Management Council (Salmon Technical Team). 2012. Preseason report III: Council adopted management measures and environmental assessment part 3 for 2012 ocean salmon fishery regulations. Regulation Identifier no. 0648-XA921. Pacific Fishery Management Council, Portland, Oregon. 40 p.
804	Pacific Fishery Management Council (Salmon Technical Team). 2012. Review of 2011 ocean salmon fisheries. Pacific Fishery Management Council, Portland, Oregon. 352 p.
1253	Pacific Fishery Management Council, Groundfish Essential Fish Habitat Review Committee. 2012. Pacific coast groundfish 5-year review of essential fish habitat. Report to the Pacific Fishery Management Council, Phase 1: New information. Pacific Fishery Management Council, Portland, Oregon. 427 p.
1143	Pipal, Kerrie A., Jeremy J. Notch, Sean A. Hayes, and Peter B. Adams. 2012. Estimating escapement for a low-abundance steelhead population using dual-frequency identification sonar (DIDSON). North American Journal of Fisheries Management 32(5):880-893.
1210	Pritchard, V.L., A. Abadia-Cardoso, and J.C. Garza. 2012. Discovery and characterization of a large number of diagnostic markers to discriminate Oncorhynchus mykiss and O. clarkii. Molecular Ecology Resources 12(5):918-931.
803	Ruegg, K., E.C. Anderson, and H. Slabbekoorn. 2012. Differences in timing of migration and response to sexual signalling drive asymmetric hybridization across a migratory divide. Journal of Evolutionary Biology 25(9):1741-1750.
909	Rundio, David E., and Steven T. Lindley. 2012. Reciprocal fluxes of stream and riparian invertebrates in a coastal California basin with Mediterranean climate. Ecological Research 27(3):539-550.
1139	Rundio, David E., Thomas H. Williams, Devon E. Pearse, and Steven T. Lindley. 2012. Male-biased sex ratio of nonanadromous Oncorhynchus mykiss in a partially migratory population in California. Ecology of Freshwater Fish 21(2):293-299.
1193	Salinas, Santiago, and Stephan B. Munch. 2012. Thermal legacies: transgenerational effects of temperature on growth in a vertebrate. Ecology Letters 15(2):159-163.
1155	Salinas, Santiago, Kestrel O. Perez, Tara A. Duffy, Stephen J. Sabatino, Lyndie A. Hice, Stephan B. Munch, and David O. Conover. 2012. The response of correlated traits following cessation of fishery-induced selection. Evolutionary Applications 5(7):657-663.
1196	Santora, Jarrod A. 2012. Habitat use of hourglass dolphins near the South Shetland Islands, Antarctica. Polar Biology 35(5):801-806.
1239	Santora, Jarrod A., John C. Field, Isaac D. Schroeder, Keith M. Sakuma, Brian K. Wells, and William J. Sydeman. 2012. Spatial ecology of krill, micronekton and top predators in the central California Current: Implications for defining ecologically important areas. Progress in Oceanography 106:154-174.
1219	Santora, Jarrod A., William J. Sydeman, Isaac D. Schroeder, Christian S. Reiss, Brian K. Wells, John C. Field, Anthony M. Cossio, and Valerie J. Loeb. 2012. Krill space: a comparative assessment of mesoscale structuring in polar and temperate marine ecosystems. ICES Journal of Marine Science 69(7):1317-1327.
839	Satterthwaite, William H., Sean A. Hayes, Joseph E. Merz, Susan M. Sogard, Danielle M. Frechette, and Marc Mangel. 2012. State-dependent migration timing and use of multiple habitat types in anadromous salmonids. Transactions of the American Fisheries Society 141(3):781-794.
1190	Satterthwaite, William Hallowell, Michael Steven Mohr, Michael Robert O'Farrell, and Brian Kenneth Wells. 2012. A Bayesian hierarchical model of size-at-age in ocean-harvested stocks: quantifying effects of climate and temporal variability. Canadian Journal of Fisheries and Aquatic Sciences 69(5):942-954.
1120	Shelton, Andrew O., E.J. Dick, Donald E. Pearson, Stephen Ralston, and Marc Mangel. 2012. Estimating species composition and quantifying uncertainty in multispecies fisheries: hierarchical Bayesian models for stratified sampling protocols with missing data. Canadian Journal of Fisheries and Aquatic Sciences 69:(2) 231-246.
1192	Sigourney, Douglas B., Stephan B. Munch, and Benjamin H. Letcher. 2012. Combining a Bayesian nonparametric method with a hierarchical framework to estimate individual and temporal variation in growth. Ecological Modelling 247:125-134.
1136	Sogard, Susan M., Joseph E. Merz, William H. Satterthwaite, Michael P. Beakes, David R. Swank, Erin M. Collins, Robert G. Titus, and Marc Mangel. 2012. Contrasts in habitat characteristics and life history patterns of Oncorhynchus mykiss in California's central coast and Central Valley. Transactions of the American Fisheries Society 141(3):747-760.
1237	Stout, Heather A., Peter W. Lawson, Daniel L. Bottom, Thomas D. Cooney, Michael J. Ford, Chris E. Jordan, Robert G. Kope, Lance M. Kruzic, George R. Pess, Gordon H. Reeves, Mark D. Scheuerell, Thomas C. Wainwright, Robin S. Waples, Eric Ward, Laurie A. Weitkamp, John G. Williams, and Thomas A. Williams. 2012. Scientific conclusions of the status review for Oregon coast coho salmon (Oncorhynchus kisutch). NOAA Technical Memorandum NMFS-NWFSC-118. 242 p.
1242	Sugihara, George, Robert May, Hao Ye, Chih-hao Hsieh, Ethan Deyle, Michael Fogarty, and Stephan Munch. 2012. Detecting causality in complex ecosystems. Science 338(6106):496-500.
1187	Vincenzi, Simone, William Hallowell Satterthwaite, and Marc Mangel. 2012. Spatial and temporal scale of density-dependent body growth and its implications for recruitment, population dynamics and management of stream-dwelling salmonid populations. Reviews in Fish Biology and Fisheries 22(3):813-825.
1233	Wells, Brian K., Jarrod A. Santora, John C. Field, R. Bruce MacFarlane, Baldo B. Marinovic, and William J. Sydeman. 2012. Population dynamics of Chinook salmon Oncorhynchus tshawytscha relative to prey availability in the central California coastal region. Marine Ecology Progress Series 457:125-137.
1217	Winship, Arliss J., Michael R. O'Farrell, and Michael S. Mohr. 2012. Management Strategy Evaluation for Sacramento River winter Chinook salmon. Report to the U.S. National Marine Fisheries Service, Southwest Region, Long Beach, California. 85 p.
509	Yoklavich, Mary, and H. Gary Greene. 2012. The Ascension-Monterey Canyon System: Habitats of demersal fishes and macroinvertebrates along the central California coast of the USA. In: Peter T. Harris and Elaine K. Baker (eds.), Seafloor geomorphology as benthic habitat: GeoHAB atlas of seafloor geomorphic features and benthic habitats, p. 739-749. Elsevier.
1103	Abadia-Cardoso, Alicia, Anthony J. Clemento, and John Carlos Garza. 2011. Discovery and characterization of single-nucleotide polymorphisms in steelhead/rainbow trout, Oncorhynchus mykiss. Molecular Ecology Resources 11(Suppl.1):31-49.
1128	Adams, Peter B., L.B. Boydstun, Sean P. Gallagher, Michael K. Lacy, Trent McDonald, and Kevin E. Shaffer. 2011. California coastal salmonid population monitoring: strategy, design, and methods. California Department of Fish and Game, Fish Bulletin no. 180. 82 p.
1162	Adams, Peter, Scott VanderKooi, and Thomas Williams 2011. Freshwater and marine habitat communities. In: Lyman Thorsteinson, Scott VanderKooi, and Walter Duffy (eds.), Proceedings of the Klamath Basin Science Conference (Medford, Oregon, February 1-5, 2010), p. 111-121. U.S. Geological Survey, Open File Report 2011-1196.
1129	Andrews, Kelly S., Gregory D. Williams, Isaac C. Kaplan, Nick Tolimieri, Jameal F. Samhouri, Phillip S. Levin, Brian K. Wells, Steven J. Bograd, Churchill B. Grimes, Elliot L. Hazen, David Huff, Steven T. Lindley, and Isaac D. Schoeder. 2011. Selecting and evaluating indicators for the California Current. In: Levin, Phillip S., and Franklin B. Schwing (eds.), Technical background for an Integrated Ecosystem Assessment of the California Current: groundfish, salmon, green sturgeon, and ecosystem health, p. 7-59. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-NWFSC-109.
1031	Babcock, E. A., and A. D. MacCall. 2011. How useful is the ratio of fish density outside versus inside no-take marine reserves as a metric for fishery management control rules? Canadian Journal of Fisheries and Aquatic Sciences 68(2):343-359.
1018	Barnett, Lewis A.K., and Brian C. Spence. 2011. Freshwater survival of stranded steelhead kelts in coastal central California streams. North American Journal of Fisheries Management 31(4):757-764.
1138	Berkson, Jim, Luiz Barbieri, Steve Cadrin, Shannon Cass-Calay, Paul Crone, Martin Dorn, Claudia Friess, Donald Kobayashi, Thomas J. Miller, Wesley S. Patrick, Sarah Pautzke, Stephen Ralston, and Michael Trianni. 2011. Calculating acceptable biological catch for stocks that have reliable catch data only (Only Reliable Catch Stocks - ORCS). NOAA Technical Memorandum NMFS-SEFSC-616. 44 p.
1207	Bjorkstedt, Eric P., Ralf Goericke, Sam McClatchie, Ed Weber, William Watson, Nancy Lo, Bill Peterson, Bob Emmett, Ric Brodeur, Jay Peterson, Marisa Litz, Jose Gomez-Valdes, Gilberto Gaxiola-Castro, Bertha Lavaniegos, Francisco Chavez, Curtis A. Collins, John Field, Keith Sakuma, Steven J. Bograd, Franklin B. Schwing, Pete Warzybok, Russell Bradley, Jaime Jahncke, Gregory S. Campbell, John A. Hildebrand, William J. Sydeman, Sarah Ann Thompson, John L. Largier, Chris Halle, Sung Yong Kim, and Jeff Abell. 2011. State of the California Current 2010-2011: Regionally variable responses to a strong (but fleeting?) La Nina. California Cooperative Oceanic Fisheries Investigations (CalCOFI) Reports 52:36-68.
716	Black, Bryan A., Isaac D. Schroeder, William J. Sydeman, Steven J. Bograd, Brian K. Wells, and Franklin B. Schwing. 2011. Winter and summer upwelling modes and their biological importance in the California Current Ecosystem. Global Change Biology 17(8):2536-2545.
1171	Brewitt, K., E. Danner, S. Lindley, and A. Pike 2011. Klamath River thermal refugia as critical habitat for threatened juvenile salmonids [abstract]. In: Lyman Thorsteinson, Scott VanderKooi, and Walter Duffy (eds.), Proceedings of the Klamath Basin Science Conference (Medford, Oregon, February 1-5, 2010), p. 273-274. U.S. Geological Survey, Open File Report 2011-1196.
1071	Claiborne, Andrew M., Joseph P. Fisher, Sean A. Hayes, and Robert L. Emmett. 2011. Size at release, size-selective mortality, and age at maturity of Willamette River hatchery yearling Chinook salmon. Transactions of the American Fisheries Society 140(4):1135-1144.
1113	Clemento, A.J., A. Abadia-Cardoso, H.A. Starks, and J.C. Garza. 2011. Discovery and characterization of single nucleotide polymorphisms in Chinook salmon, Oncorhynchus tshawytscha. Molecular Ecology Resources 11(Suppl.1):50-66.
1154	Cope, Jason M., John DeVore, E.J. Dick, Kelly Ames, John Budrick, Daniel L. Erickson, Joanna Grebel, Gretchen Hanshew, Robert Jones, Lynn Mattes, and Corey Niles. 2011. An approach to defining stock complexes for U.S. west coast groundfishes using vulnerabilities and ecological distributions. North American Journal of Fisheries Management 31(4):589-604.
1066	Cowan, J.H., Jr., C.B. Grimes, W.F. Patterson III, C.J. Walters, A.C. Jones, W.J. Lindberg, D.J. Sheehy, W.E. Pine III, J.E. Powers, M.D. Campbell, K.C. Lindeman, S.L. Diamond, R. Hilborn, H.T. Gibson, and K.A. Rose. 2011. Red snapper management in the Gulf of Mexico: science- or faith-based? Reviews in Fish Biology and Fisheries 21(2):187-204.
1168	Danner, E., S. Lindley, A. Pike, and K. Brewitt 2011. Klamath River stream temperature modeling and use of thermal refugia by salmonids [abstract]. In: Lyman Thorsteinson, Scott VanderKooi, and Walter Duffy (eds.), Proceedings of the Klamath Basin Science Conference (Medford, Oregon, February 1-5, 2010), p. 259-260. U.S. Geological Survey, Open File Report 2011-1196.
1035	Dick, E.J. 2011. Cowcod status report. Report to the Pacific Fishery Management Council, Portland, Oregon. 17 p.
755	Dick, E.J., and Alec D. MacCall. 2011. Depletion-Based Stock Reduction Analysis: A catch-based method for determining sustainable yields for data-poor fish stocks. Fisheries Research 110(2):331-341.
1036	Dick, E.J., Don Pearson, and Steve Ralston. 2011. Status of greenspotted rockfish, Sebastes chlorostictus, in U.S. waters off California. Report to the Pacific Fishery Management Council, Portland, Oregon. 340 p.
1028	Duffy, Walter G., Eric P. Bjorkstedt, and Christopher S. Ellings. 2011. Predation on juvenile Pacific salmon Oncorhynchus spp. in downstream migrant traps in Prairie Creek, California. North American Journal of Fisheries Management 31(1):151-164.
787	Finger, Amanda J., Eric C. Anderson, Molly R. Stephens, and Bernard P. May. 2011. Application of a method for estimating effective population size and admixture using diagnostic single nucleotide polymorphisms (SNPs): implications for conservation of threatened Paiute cutthroat trout (Oncorhynchus clarkii seleniris) in Silver King Creek, California. Canadian Journal of Fisheries and Aquatic Sciences 68(8):1369-1386.
1167	Fujiwara, M., A. Greenberg, and M.S. Mohr 2011. Effects of myxozoa disease on population dynamics of Klamath fall Chinook salmon [abstract]. In: Lyman Thorsteinson, Scott VanderKooi, and Walter Duffy (eds.), Proceedings of the Klamath Basin Science Conference (Medford, Oregon, February 1-5, 2010), p. 236. U.S. Geological Survey, Open File Report 2011-1196.
1088	Fujiwara, Masami, Michael S. Mohr, Aaron Greenberg, J. Scott Foott, and Jerri L. Bartholomew. 2011. Effects of ceratomyxosis on population dynamics of Klamath fall-run Chinook salmon. Transactions of the American Fisheries Society 140(5):1380-1391.
621	Fullerton, Aimee H., Steven T. Lindley, George R. Pess, Blake E. Feist, E. Ashley Steel, and Paul McElhany. 2011. Human influence on the spatial structure of threatened Pacific salmon metapopulations. Conservation Biology 25(5):932-944.
1033	Glaser, Sarah M., Hao Ye, Mark Maunder, Alec MacCall, Michael Fogarty, and George Sugihara. 2011. Detecting and forecasting complex nonlinear dynamics in spatially structured catch-per-unit-effort time series for North Pacific albacore (Thunnus alalunga). Canadian Journal of Fisheries and Aquatic Sciences 68(3):400–412.
943	Harding, Jeffrey A., Arnold J. Ammann, and R. Bruce MacFarlane. 2011. Regional and seasonal patterns of epipelagic fish assemblages from the central California Current. Fishery Bulletin 109(3):261-281.
1122	Harvey, Chris J., John C. Field, Sabrina G. Beyer, and Susan M. Sogard. 2011. Modeling growth and reproduction of chilipepper rockfish under variable environmental conditions. Fisheries Research 109(1):187-200.
1072	Hayes, Sean A., Morgan H. Bond, Chad V. Hanson, Andrew W. Jones, Arnold J. Ammann, Jeffrey A. Harding, Alison L. Collins, Jeffrey Perez, and R. Bruce MacFarlane. 2011. Down, up, down and "smolting" twice? Seasonal movement patterns by juvenile steelhead (Oncorhynchus mykiss) in coastal watershed with bar closing estuary. Canadian Journal of Fisheries and Aquatic Sciences 68(8):1341-1350.
1131	Hazen, Elliott L., William J. Sydeman, Isaac D. Schroeder, Sarah A. Thompson, Brian K. Wells, Steven T. Lindley, Churchill B. Grimes, Steven J. Bograd, and Franklin B. Schwing. 2011. Status of the California Current Ecosystem: major EBM drivers and pressures. In: Levin, Phillip S., and Franklin B. Schwing (eds.), Technical background for an Integrated Ecosystem Assessment of the California Current: groundfish, salmon, green sturgeon, and ecosystem health, p. 99-110. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-NWFSC-109.
1020	He, Xi, Donald E. Pearson, E.J. Dick, John C. Field, Stephen Ralston, and Alec D. MacCall. 2011. Status of the widow rockfish resource in 2011. Report to the Pacific Fishery Management Council, Portland, Oregon. 317 p.
1079	He, Xi, Stephen Ralston, and Alec D. MacCall. 2011. Interactions of age-dependent mortality and selectivity functions in age-based stock assessment models. Fishery Bulletin 109(2)198-216.
1164	Hendrix, N., S. Lindley, J. Hamilton, J. Simondet, and C. Huntington 2011. Conceptual design and approach for modeling fall-run Chinook production post dam removal [abstract]. In: Lyman Thorsteinson, Scott VanderKooi, and Walter Duffy (eds.), Proceedings of the Klamath Basin Science Conference (Medford, Oregon, February 1-5, 2010), p. 217-218. U.S. Geological Survey, Open File Report 2011-1196.
1147	Huff, David D., Steven T. Lindley, Polly S. Rankin, and Ethan A. Mora. 2011. Green sturgeon physical habitat use in the coastal Pacific Ocean. PLoS ONE 6(9):e25156. 12 p.
1134	Kinziger, Andrew P., Rodney J. Nakamoto, Eric C. Anderson, and Bret C. Harvey. 2011. Small founding number and low genetic diversity in an introduced species exhibiting limited invasion success (speckled dace, Rhinichthys osculus). Ecology and Evolution 1(1):73-84.
1105	Klamath River Technical Team. 2011. Klamath River fall Chinook salmon age-specific escapement, river harvest, and run size estimates, 2010 run. Klamath River Technical Team. 21 p.
1115	Klamath River Technical Team. 2011. Ocean abundance projections and prospective harvest levels for Klamath River fall Chinook, 2011 season. Klamath River Technical Team. 37 p.
870	Lindley, Steven T., Daniel L. Erickson, Mary L. Moser, Greg Williams, Olaf P. Langness, Barry W. McCovey Jr., Michael Belchik, Dave Vogel, William Pinnix, John T. Kelly, Joseph C. Heublein, and A. Peter Klimley. 2011. Electronic tagging of green sturgeon reveals population structure and movement among estuaries. Transactions of the American Fisheries Society 140(1):108-122.
1042	MacCall, Alec D. 2011. Foreword. In: A. Belgrano and C.W. Fowler (eds.), Ecosystem-based management for marine fisheries: an evolving perspective, p. xiii-xvi. Cambridge University Press.
719	MacCall, Alec D. 2011. The sardine-anchovy puzzle. In: Jeremy B.C. Jackson, Karen E. Alexander, and Enric Sala (eds.), Shifting baselines: the past and future of ocean fisheries, p. 47-57. Island Press.
1117	MacCall, Alec D., and Steven L.H. Teo. 2011. Exploration of a hybrid stock synthesis-VPA model of Pacific bluefin tuna to distinguish between trends in recruitment and changes in fishing intensity on young fish. Working document submitted to the ISC Pacific bluefin tuna Working Group, International Scientific Committee for Tuna and Tuna-Like Species in the North Pacific Ocean (ISC), 6-13 January 2011, Shimizu-ku, Shizuoka, Japan. ISC document no. ISC/11-1/PBFWG/01. 12 p.
1142	MacCall, Alec, Brad Erisman, Ashley Apel, and Rod Fujita. 2011. Data-poor models for assessing gulf curvina and evaluating management alternatives. Report supporting a presentation at Ensenada, BCN, on 11 May, 2011. 10 p.
1069	Martinez, Andres, John Carlos Garza, and Devon E. Pearse. 2011. A microsatellite genome screen identifies chromosomal regions under differential selection in steelhead and rainbow trout. Transactions of the American Fisheries Society 140(3):829-842.
1208	Mazzillo, Fernanda F.M., John C. Field, Danna J. Staaf, Melissa L. Carter, and Mark D. Ohman. 2011. A note on the detection of the neurotoxin domoic acid in beach-stranded Dosidicus gigas in the Southern California Bight. California Cooperative Oceanic Fisheries Investigations (CalCOFI) Reports 52:109-115.
1032	McGilliard, Carey R., Ray Hilborn, Alec MacCall, Andre E. Punt, and John C. Field. 2011. Can information from marine protected areas be used to inform control-rule-based management of small-scale, data-poor stocks? ICES Journal of Marine Science 68(1):201-211.
514	Moore, Jonathan W., Sean A. Hayes, Walter Duffy, Sean Gallagher, Cyril J. Michel, and David Wright. 2011. Nutrient fluxes and the recent collapse of coastal California salmon populations. Canadian Journal of Fisheries and Aquatic Sciences 68(7):1161-1170.
556	Moustahfid, Hassan, Churchill Grimes, John Kocik, Barbara Block, Kim Holland, John Payne, Dewayne Fox, Andrew Seitz, and Charles Alexander. 2011. Toward a national Animal Telemetry Observing Network (ATN) for our oceans, coasts and great lakes: workshop synthesis report (U.S. IOOS workshop, March 2011, Santa Cruz, California). NOAA Technical Memorandum NMFS-SWFSC-482. 51 p.
1149	Pacific Fishery Management Council (Salmon Technical Team). 2011. Preseason report I: Stock abundance analysis and environmental assessment Part 1 for 2011 ocean salmon fishery regulations. Pacific Fishery Management Council, Portland, Oregon. 123 p.
1150	Pacific Fishery Management Council (Salmon Technical Team). 2011. Preseason report II: Proposed alternatives and environmental assessment Part 2 for ocean salmon fishery regulations. Pacific Fishery Management Council, Portland, Oregon. 58 p.
1151	Pacific Fishery Management Council (Salmon Technical Team). 2011. Preseason report III: Analysis of Council adopted management measures for 2011 ocean salmon fisheries. Pacific Fishery Management Council, Portland, Oregon. 37 p.
1148	Pacific Fishery Management Council (Salmon Technical Team). 2011. Review of 2010 ocean salmon fisheries. Pacific Fishery Management Council, Portland, Oregon. 335 p.
1166	Pearse, D., J.C. Garza, and M. Peterson 2011. Population genetics of Klamath Basin Oncorhynchus mykiss [abstract]. In: Lyman Thorsteinson, Scott VanderKooi, and Walter Duffy (eds.), Proceedings of the Klamath Basin Science Conference (Medford, Oregon, February 1-5, 2010), p. 227. U.S. Geological Survey, Open File Report 2011-1196.
987	Pearse, Devon E., Edith Martinez, and John Carlos Garza. 2011. Disruption of historical patterns of isolation by distance in coastal steelhead. Conservation Genetics 12(3):691-700.
1068	Pearse, Devon E., Stephanie L. Gunckel, and Steven E. Jacobs. 2011. Population structure and genetic divergence of coastal rainbow and redband trout in the upper Klamath basin. Transactions of the American Fisheries Society 140(3):587-597.
1170	Peterman, R.M., P.B. Adams, B. Dorner, D.L. Drake, H.J. Geiger, K. Holt, C. Jordan, D.P. Larsen, S.A. Leider, R.H. Lincoln, A.R. Olsen, C.K. Parken, J.D. Rodgers, and S. Walbridge 2011. The Salmon Monitoring Advisor: a hierarchical web site to help design and implement salmon monitoring programs [abstract]. In: Lyman Thorsteinson, Scott VanderKooi, and Walter Duffy (eds.), Proceedings of the Klamath Basin Science Conference (Medford, Oregon, February 1-5, 2010), p. 271. U.S. Geological Survey, Open File Report 2011-1196.
1169	Pipal, K., M. Jessop, and P. Adams 2011. Use of dual frequency identification sonar (DIDSON) to estimate low abundance salmonid escapement in California watersheds [abstract]. In: Lyman Thorsteinson, Scott VanderKooi, and Walter Duffy (eds.), Proceedings of the Klamath Basin Science Conference (Medford, Oregon, February 1-5, 2010), p. 270. U.S. Geological Survey, Open File Report 2011-1196.
10	Ralston, Stephen, Andre E. Punt, Owen S. Hamel, John D. DeVore, and Ramon J. Conser. 2011. A meta-analytic approach to quantifying scientific uncertainty in stock assessments. Fishery Bulletin 109(2):217-231.
1153	Santora, Jarrod A., Stephen Ralston, and William J. Sydeman. 2011. Spatial organization of krill and seabirds in the central California Current. ICES Journal of Marine Science 68(7):1391-1402.
1152	Santora, Jarrod A., William J. Sydeman, Isaac D. Schroeder, Brian K. Wells, and John C. Field. 2011. Mesoscale structure and oceanographic determinants of krill hotspots in the California Current: Implications for trophic transfer and conservation. Progress in Oceanography 91(4):397-409.
1223	Smith, Christian, Denise Hawkins, and John Carlos Garza. 2011. Summary of genetic data collected for rapid response Chinook salmon assignment, and evaluation of new markers and assignment tools: Report for FY 2010. Report submitted to the Coleman National Fish Hatchery, Anderson, California (updated August 10, 2011). 29 p.
1039	Sogard, Susan M. 2011. Interannual variability in growth rates of early juvenile sablefish and the role of environmental factors. Bulletin of Marine Science 87(4):857-872.
1213	Sogard, Susan, John Field, Chris Harvey, and Sabrina Beyer. 2011. An evaluation of the significance of climate forcing on time-varying growth and fecundity of rockfish in the California Current (Final report). Report to NOAA Fisheries and the Environment (FATE) program, Project 09-09. NOAA National Marine Fisheries Service, Silver Spring, Maryland. 21 p.
963	Spence, Brian C., and Thomas H. Williams. 2011. Status review update for Pacific salmon and steelhead listed under the Endangered Species Act: Central California Coast Coho Salmon ESU. NOAA Technical Memorandum NMFS-SWFSC-475. 15 p.
757	Spence, Brian C., Walter G. Duffy, John Carlos Garza, Bret C. Harvey, Susan M. Sogard, Laurie A. Weitkamp, Thomas H. Williams, and David A. Boughton. 2011. Historical occurrence of coho salmon (Oncorhynchus kisutch) in streams of the Santa Cruz Mountain region of California: response to an Endangered Species Act petition to delist coho salmon south of San Francisco Bay. NOAA Technical Memorandum NMFS-SWFSC-472. 113 p.
1214	Sugihara, George, John Beddington, Chih-hao Hsieh, Ethan Deyle, Michael Fogarty, Sarah M. Glaser, Roger Hewitt, Anne Hollowed, Robert M. May, Stephan B. Munch, Charles Perretti, Andrew A. Rosenberg, Stuart Sandin, and Hao Ye. 2011. Are exploited fish populations stable? Proceedings of the National Academy of Sciences of the United States of America 108(48):E1224-1225.
1127	Sydeman, William J., Sarah Ann Thompson, John C. Field, William T. Peterson, Ronald W. Tanasichuk, Howard J. Freeland, Steven J. Bograd, and Ryan R. Rykaczewski. 2011. Does positioning of the North Pacific Current affect downstream ecosystem productivity? Geophysical Research Letters 38:L12606 (6 p.).
1165	Thomson, C. 2011. Evaluating economic effects on fisheries association with Klamath dam removal [abstract]. In: Lyman Thorsteinson, Scott VanderKooi, and Walter Duffy (eds.), Proceedings of the Klamath Basin Science Conference (Medford, Oregon, February 1-5, 2010), p. 218. U.S. Geological Survey, Open File Report 2011-1196.
1163	Thomson, C. 2011. Monitoring fishery effects of salmonid habitat restoration [abstract]. In: Lyman Thorsteinson, Scott VanderKooi, and Walter Duffy (eds.), Proceedings of the Klamath Basin Science Conference (Medford, Oregon, February 1-5, 2010), p. 208-209. U.S. Geological Survey, Open File Report 2011-1196.
1161	Thorsteinson, Lyman, Churchill Grimes, and Walter Duffy 2011. An overview of the Klamath Basin Science Conference. In: Lyman Thorsteinson, Scott VanderKooi, and Walter Duffy (eds.), Proceedings of the Klamath Basin Science Conference (Medford, Oregon, February 1-5, 2010), p. 1-29. U.S. Geological Survey, Open File Report 2011-1196.
1130	Tolimieri, Nick, Gregory D. Williams, Kelly S. Andrews, Phillip S. Levin, Brian K. Wells, Steven J. Bograd, Churchill B. Grimes, Elliott L. Hazen, David Hugg, Steven T. Lindley, and Isaac D. Schroeder. 2011. Status of the California Current Ecosystem: major EBM components. In: Levin, Phillip S., and Franklin B. Schwing (eds.), Technical background for an Integrated Ecosystem Assessment of the California Current: groundfish, salmon, green sturgeon, and ecosystem health, p. 60-98. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-NWFSC-109.
1132	Tolimieri, Nick, Gregory D. Williams, Kelly S. Andrews, Phillip S. Levin, Elliott L. Hazen, William J. Sydeman, Isaac D. Schroeder, Sarah A. Thompson, Brian K. Wells, Steven T. Lindley, Churchill B. Grimes, Steven J. Bograd, and Franklin B. Schwing. 2011. Appendix C: Data sources. In: Levin, Phillip S., and Franklin B. Schwing (eds.), Technical background for an Integrated Ecosystem Assessment of the California Current: groundfish, salmon, green sturgeon, and ecosystem health, p. 275-284. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-NWFSC-109.
958	Williams, Thomas H., Steven T. Lindley, Brian C. Spence, and David A. Boughton. 2011. Status review update for Pacific salmon and steelhead listed under the Endangered Species Act: Southwest. Report to the NMFS Southwest and Northwest Regions, May 20, 2011. NOAA National Marine Fisheries Service, Southwest Fisheries Science Center, Santa Cruz, California. 98 p.
1206	Yoklavich, Mary, and Lisa Wedding. 2011. Relating population abundance of groundfish species to habitats using predictive models and broad-scale seafloor maps: annual report FY11. Habitat Assessment funded research: progress report to the NMFS Office of Science and Technology. NOAA National Marine Fisheries Service, Santa Cruz, California. 3 p.
1189	Yoklavich, Mary, Tom Laidig, Diana Watters, Lisa Krigsman, Andrew Taylor, Milton Love, John Kloske, and Steve Untiedt. 2011. Understanding the capabilities of new technologies and methods to survey West Coast groundfishes: a visual survey using Dual Deepworker submersible. Quicklook cruise report (21-30 September 2011). NOAA National Marine Fisheries Service, SWFSC Fisheries Ecology Division, Santa Cruz, California. 4 p.
1186	Yoklavich, Mary, Tom Laidig, Lisa Krigsman, Andrew Taylor, Diana Watters, Milton Love, Lonny Lundsten, and Ben Negrete. 2011. A characterization of the coral and sponge community on Piggy Bank seamount in southern California from a survey using a remotely operated vehicle. Report to the NOAA Deep-Sea Coral Research and Technology Program. 63 p.
1012	Anderson, E. C. 2010. Assessing the power of informative subsets of loci for population assignment: standard methods are upwardly biased. Molecular Ecology Resources 10(4):701-710.
1030	Anderson, Eric C. 2010. Computational algorithms and user-friendly software for parentage-based tagging of Pacific salmonids. Final report submitted to the Pacific Salmon Commission's Chinook Technical Committee (US Section). 46 p.
992	Beakes, Michael P., William H. Satterthwaite, Erin M. Collins, David R. Swank, Joseph E. Merz, Robert G. Titus, Susan M. Sogard, and Marc Mangel. 2010. Smolt transformation in two California steelhead populations: effects of temporal variability in growth. Transactions of the American Fisheries Society 139(5):1263-1275.
1179	Berkson, Jim, Luiz Barbieri, Steve Cadrin, Shannon L. Cass-Calay, Andy Cooper, Paul Crone, Martin Dorn, Claudia Friess, Don Kobayashi, Thomas Miller, Wesley S. Patrick, Sarah Pautzke, Stephen Ralston, and Michael Trianni 2010. Setting allowable biological catch for stocks with reliable catch data only [abstract]. In: Kristan Blackhart (ed.), Proceedings: 11th National Stock Assessment Workshop: Characterization of scientific uncertainty in assessments to improve determination of acceptable biological catches (ABCs); Joint Session of the National Stock and Habitat Assessment Workshops: Incorporating habitat information in stock assessments; and 1st National Habitat Assessment Workshop: Moving towards a national habitat science program (St. Petersburg, Florida, May 17-20, 2010), p. 106. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-F/SPO-112.
717	Bjorkstedt, Eric P., Ralf Goericke, Sam McClatchie, Ed Weber, William Watson, Nancy Lo, Bill Peterson, Bob Emmett, Jay Peterson, Reginaldo Durazo, Gilberto Gaxiola-Castro, Francisco Chavez, J.T. Pennington, C.A. Collins, John Field, Steve Ralston, Keith Sakuma, Steve J. Bograd, Franklin B. Schwing, Yan Xue, William J. Sydeman, Sarah Ann Thompson, Jarrod A. Santora, John Largier, Chris Halle, Steven Morgan, Sung Yong Kim, Karlina P.B. Merkens, John A. Hildebrand, and Lisa M. Munger. 2010. State of the California Current 2009-2010: Regional variation persists through transition from La Nina to El Nino (and back?). CalCOFI Reports 51:39-69.
1200	Bjorkstedt, Eric P., Steve Ralston, John Field, Xi He, and Robert VanKirk. 2010. Developing recruitment indices for West Coast rockfish using individual-based models and environmentally forces ocean circulation models. Report to NOAA Fisheries and the Environment (FATE) program, Project 09-02. NOAA National Marine Fisheries Service, Silver Spring, Maryland. 2 p.
1173	Bjorkstedt, Eric, and Stephen Ralston 2010. Insights for stock assessment and empirical prerecruit indices from an environmentally forced individual-based model of early life history stages for west coast rockfishes [abstract]. In: Kristan Blackhart (ed.), Proceedings: 11th National Stock Assessment Workshop: Characterization of scientific uncertainty in assessments to improve determination of acceptable biological catches (ABCs); Joint Session of the National Stock and Habitat Assessment Workshops: Incorporating habitat information in stock assessments; and 1st National Habitat Assessment Workshop: Moving towards a national habitat science program (St. Petersburg, Florida, May 17-20, 2010), p. 108. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-F/SPO-112.
696	Bograd, Steven J., William J. Sydeman, J. Barlow, A. Booth, R.D. Brodeur, J. Calambokidis, F. Chavez, W.R. Crawford, E. Di Lorenzo, R. Durazo, R. Emmett, J. Field, G. Gaxiola-Castro, W. Gilly, R. Goericke, J. Hildebrand, J.E. Irvine, M. Kahru, J.A. Koslow, B. Lavaniegos, M. Lowry, D.L. Mackas, M. Manzano-Sarabia, S.M. McKinnell, B.G. Mitchell, L. Munger, R.I. Perry, W.T. Peterson, S. Ralston, J. Schweigert, A. Suntsov, R. Tanasichuk, A.C. Thomas, and F. Whitney. 2010. Status and trends of the California Current region, 2003-2008. In: Stewart M. McKinnell and Michael J. Dagg (eds.), Marine ecosystems of the north Pacific Ocean, 2003-2008, p. 106-141. PICES Special Publication no. 4.
9	Boughton, David A. 2010. A forward-looking scientific frame of reference for steelhead recovery on the south-central and southern California coast. NOAA Technical Memorandum NMFS-466. 46 p.
931	Boughton, David A. 2010. Estimating the size of steelhead runs by tagging juveniles and monitoring migrants. North American Journal of Fisheries Management 30(1):89-101.
7	Boughton, David A. 2010. Some research questions on recovery of steelhead on the south-central and southern California coast. NOAA Technical Memorandum NMFS-SWFSC-467. 14 p.
1044	Dick, E. J., and A. D. MacCall. 2010. Estimates of sustainable yield for 50 data-poor stocks in the Pacific Coast groundfish fishery management plan. NOAA Technical Memorandum NMFS-SWFSC-460. (201 p.)
1174	Dick, E.J., and Alec MacCall 2010. Determining yields for data-poor stocks using a DCAC-based stock reduction analysis of catch history [abstract]. In: Kristan Blackhart (ed.), Proceedings: 11th National Stock Assessment Workshop: Characterization of scientific uncertainty in assessments to improve determination of acceptable biological catches (ABCs); Joint Session of the National Stock and Habitat Assessment Workshops: Incorporating habitat information in stock assessments; and 1st National Habitat Assessment Workshop: Moving towards a national habitat science program (St. Petersburg, Florida, May 17-20, 2010), p. 95. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-F/SPO-112.
1075	Drake, Jonathan S., Ewann A. Berntson, Jason M. Cope, Richard G. Gustafson, Elizabeth E. Holmes, Phillip S. Levin, Nick Tolimieri, Robin S. Waples, Susan M. Sogard, and Gregory D. Williams. 2010. Status review of five rockfish species in Puget Sound, Washington: bocaccio (Sebastes paucispinis), canary rockfish (S. pinniger), yelloweye rockfish (S. ruberrimus), greenstriped rockfish (S. elongatus), and redstripe rockfish (S. proriger). NOAA Technical Memorandum NMFS-NWFSC-108. 234 p.
816	Field, J.C., A.D. MacCall, R.W. Bradley, and W.J. Sydeman. 2010. Estimating the impacts of fishing on dependent predators: a case study in the California Current. Ecological Applications 20(8):2223-2236.
1034	Field, John C., Alec D. MacCall, Stephen Ralston, Milton S. Love, and Eric F. Miller. 2010. Bocaccionomics: the effectiveness of pre-recruit indices for assessment and management of bocaccio. CalCOFI Reports 51:77-90.
983	Field, John, Jason Cope, and Meisha Key. 2010. A descriptive example of applying vulnerability evaluation criteria to California nearshore finfish species. In: Managing data-poor fisheries: case studies, models and solutions (1-4 December 2008, Berkeley, CA), p. 235-246. California Sea Grant College Program.
1145	Frechette, Danielle. 2010. Impacts of avian predation on juvenile salmonids in central California watersheds. Master's thesis, San Jose State University, Moss Landing Marine Laboratories. 109 p.
959	Fujita, R.M., K.T. Honey, A. Morris, J.R. Wilson, and H. Russell. 2010. Cooperative strategies in fisheries management: integrating across scales. Bulletin of Marine Science 86(2):251-271.
1043	Gallagher, S. P., D. W. Wright, B. W. Collins, and P. B. Adams. 2010. A regional approach for monitoring salmonid status and trends: results from a pilot study in coastal Mendocino County, California. North American Journal of Fisheries Management 30(5):1075-1085.
1080	Gallagher, Sean P., Peter B. Adams, David W. Wright, and Barry W. Collins. 2010. Performance of spawner survey techniques at low abundances levels. North American Journal of Fisheries Management 30(5):1086-1097.
1184	Goldfinger, Chris, H. Gary Greene, Rikk G. Kvitek, Guy R. Cochrane, Samuel Y. Johnson, W. Waldo Wakefield, Mary M. Yoklavich, M. Elizabeth Clarke, and Crescent Moegling 2010. Mapping marine benthic habitats along the U.S. west coast: current status, future plans and applications [abstract]. In: Kristan Blackhart (ed.), Proceedings: 11th National Stock Assessment Workshop: Characterization of scientific uncertainty in assessments to improve determination of acceptable biological catches (ABCs); Joint Session of the National Stock and Habitat Assessment Workshops: Incorporating habitat information in stock assessments; and 1st National Habitat Assessment Workshop: Moving towards a national habitat science program (St. Petersburg, Florida, May 17-20, 2010), p. 126. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-F/SPO-112.
1175	Grimes, Churchill B., Stephen Ralston, John C. Field, Brian Wells, and Mary M. Yoklavich. 2010. Informing and improving stock assessments with marine habitat information [abstract]. In: Kristan Blackhart (ed.), Proceedings: 11th National Stock Assessment Workshop: Characterization of scientific uncertainty in assessments to improve determination of acceptable biological catches (ABCs); Joint Session of the National Stock and Habitat Assessment Workshops: Incorporating habitat information in stock assessments; and 1st National Habitat Assessment Workshop: Moving towards a national habitat science program (St. Petersburg, Florida, May 17-20, 2010), p. 94. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-F/SPO-112.
1046	ISC Pacific Bluefin Tuna Working Group. 2010. Report of the Pacific Bluefin Tuna Working Group workshop (6-9 July 2010, Nanaimo, Canada). International Scientific Committee for Tuna and Tuna-like Species in the North Pacific Ocean. 32 p.
1102	Klamath River Technical Team. 2010. Klamath River fall Chinook age-specific escapement, river harvest, and run size estimates, 2009 run. Klamath River Technical Team. 18 p.
1099	Klamath River Technical Team. 2010. Ocean abundance projections and prospective harvest levels for Klamath River fall Chinook, 2010 season. Klamath River Technical Team. 37 p.
1185	Krigsman, Lisa, Mary M. Yoklavich, and Guy R. Cochrane 2010. Multivariate models to predict distribution of structure-forming benthic invertebrates [abstract]. In: Kristan Blackhart (ed.), Proceedings: 11th National Stock Assessment Workshop: Characterization of scientific uncertainty in assessments to improve determination of acceptable biological catches (ABCs); Joint Session of the National Stock and Habitat Assessment Workshops: Incorporating habitat information in stock assessments; and 1st National Habitat Assessment Workshop: Moving towards a national habitat science program (St. Petersburg, Florida, May 17-20, 2010), p. 133. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-F/SPO-112.
1029	Laidig, Thomas E. 2010. Influence of ocean conditions on the timing of early life history events for blue rockfish (Sebastes mystinus) off California. Fishery Bulletin 108(4):442-449.
1176	Lindley, Steve 2010. Predicting the distribution of anadromous fish in fresh water using habitat models [abstract]. In: Kristan Blackhart (ed.), Proceedings: 11th National Stock Assessment Workshop: Characterization of scientific uncertainty in assessments to improve determination of acceptable biological catches (ABCs); Joint Session of the National Stock and Habitat Assessment Workshops: Incorporating habitat information in stock assessments; and 1st National Habitat Assessment Workshop: Moving towards a national habitat science program (St. Petersburg, Florida, May 17-20, 2010), p. 134. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-F/SPO-112.
1023	Link, J. S., T. F. Ihde, H. M. Townsend, K. E. Osgood, M. J. Schirripa, D. R. Kobayashi, S. Gaichas, J. C. Field, P. S. Levin, K. Y. Aydin, and C. J. Harvey (eds.). 2010. Report of the 2nd National Ecosystem Modeling Workshop (NEMoW II): Bridging the credibility gap - Dealing with uncertainty in ecosystem models. NOAA Technical Memorandum NMFS-F/SPO-102. 72 p.
910	MacFarlane, R. B. 2010. Energy dynamics and growth of Chinook salmon (Oncorhynchus tshawytscha) from the Central Valley of California during the estuarine phase and first ocean year. Canadian Journal of Fisheries and Aquatic Sciences 67(10):1549-1565.
1172	McBride, Richard S., Eric Bjorkstedt, and David Dale 2010. Joint Session Breakout 2A: Including habitat-specific life history rates in population models, groundfish/reef & untrawlable/diadromous groups. In: Kristan Blackhart (ed.), Proceedings: 11th National Stock Assessment Workshop: Characterization of scientific uncertainty in assessments to improve determination of acceptable biological catches (ABCs); Joint Session of the National Stock and Habitat Assessment Workshops: Incorporating habitat information in stock assessments; and 1st National Habitat Assessment Workshop: Moving towards a national habitat science program (St. Petersburg, Florida, May 17-20, 2010), p. 31-33. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-F/SPO-112.
1118	Michel, Cyril J. 2010. River and estuarine survival and migration of yearling Sacramento River Chinook salmon (Oncorhynchus tshawytscha) smolts and the influence of environment. Master's thesis, University of California, Santa Cruz. 120 p.
1116	Miller, Jessica A., Brian K. Wells, Susan M. Sogard, Churchill B. Grimes, and Gregor M. Cailliet. 2010. Introduction to proceedings of the 4th International Otolith Symposium. Environmental Biology of Fishes 89(3-4):203-207.
1076	Nelson, Troy C., Phaedra Doukakis, Steven T. Lindley, Andrea Drauch Schreier, Joseph E. Hightower, Larry R. Hildebrand, Rebecca E. Whitlock, and Molly A.H. Webb. 2010. Modern technoloiges for an ancient fish: tools to inform management of migratory sturgeon stocks. A report for the Pacific Ocean Shelf Tracking (POST) Project. 55 p.
637	O'Farrell, Michael, Melodie Palmer-Zwahlen, and Jennifer Simon. 2010. Is the September 1 river return date approximation appropriate for Klamath River fall Chinook? NOAA Technical Memorandum NMFS-SWFSC-468. 17 p.
1094	Pacific Fishery Management Council (Salmon Technical Team). 2010. Preseason report I: Stock abundance analysis for 2010 ocean salmon fisheries. Pacific Fishery Management Council, Portland, Oregon. 103 p.
1095	Pacific Fishery Management Council (Salmon Technical Team). 2010. Preseason report II: Analysis of proposed regulatory options for 2010 ocean salmon fisheries. Pacific Fishery Management Council, Portland, Oregon. 44 p.
1096	Pacific Fishery Management Council (Salmon Technical Team). 2010. Preseason report III: Analysis of Council adopted management measures for 2010 ocean salmon fisheries. Pacific Fishery Management Council, Portland, Oregon. 38 p.
1093	Pacific Fishery Management Council (Salmon Technical Team). 2010. Review of 2009 ocean salmon fisheries. Pacific Fishery Management Council, Portland, Oregon. 331 p.
1063	Patrick, Wesley S., Paul Spencer, Jason Link, Jason Cope, John Field, Donald Kobayashi, Peter Lawson, Todd Gedamke, Enric Cortés, Olav Ormseth, Keith Bigelow, and William Overholtz. 2010. Using productivity and susceptibility indices to assess the vulnerability of United States fish stocks to overfishing. Fishery Bulletin 108(3):305-322.
1038	Payne, John, Kelly Andrews, Cedar Chittenden, Glenn Crossin, Fred Goetz, Scott Hinch, Phil Levin, Steve Lindley, Scott McKinley, Michael Melnychuk, Troy Nelson, Erin Rechisky, and David Welch. 2010. Tracking fish movements and survival on the northeast Pacific shelf. In: Alasdair D. McIntyre (ed.), Life in the world's oceans: diversity, distribution, and abundance, p. 269-290. Wiley-Blackwell.
965	Perry, Russell W., John R. Skalski, Patricia L. Brandes, Philip T. Sandstrom, A. Peter Klimley, Arnold Ammann, and Bruce MacFarlane. 2010. Estimating survival and migration route probabilities of juvenile Chinook salmon in the Sacramento-San Joaquin River Delta. North American Journal of Fisheries Management 30(1):142-156.
966	Petersen, Christine H., Patrick T. Drake, Christopher A. Edwards, and Stephen Ralston. 2010. A numerical study of inferred rockfish (Sebastes spp.) larval dispersal along the central California coast. Fisheries Oceanography 19(1):21-41.
1022	Pipal, K., M. Jessop, G. Holt, and P. Adams. 2010. Operation of dual-frequency identification sonar (DIDSON) to monitor adult steelhead (Oncorhynchus mykiss) in the central California coast. NOAA Technical Memorandum NMFS-SWFSC-454. 80 p.
915	Pipal, Kerrie, Mark Jessop, David Boughton, and Peter Adams. 2010. Using dual-frequency identification sonar (DIDSON) to estimate adult steelhead escapement in the San Lorenzo River, California. California Fish and Game 96(1):90-95.
967	Ralston, S., and B. R. MacFarlane. 2010. Population estimation of bocaccio (Sebastes paucispinis) based on larval production. Canadian Journal of Fisheries and Aquatic Sciences 67(6):1005-1020.
1062	Ralston, S., E.J. Dick, and J. Field (eds.). 2010. NMFS Southwest Fisheries Science Center: Draft agency report to the Technical Subcommittee of the Canada-U.S. Groundfish Committee. In: Report of the Technical Subcommittee of the Canada-United States Groundfish Committee: 51st annual meeting of the TSC (May 5-6, 2010, Nanaimo, British Columbia), p. 212-232. Pacific States Marine Fisheries Commission.
1178	Ralston, Stephen, Andre E. Punt, and other members of the Pacific Fishery Management Council Scientific and Statistical Committee 2010. Some aspects of scientific uncertainty in west coast stock assessments [abstract]. In: Kristan Blackhart (ed.), Proceedings: 11th National Stock Assessment Workshop: Characterization of scientific uncertainty in assessments to improve determination of acceptable biological catches (ABCs); Joint Session of the National Stock and Habitat Assessment Workshops: Incorporating habitat information in stock assessments; and 1st National Habitat Assessment Workshop: Moving towards a national habitat science program (St. Petersburg, Florida, May 17-20, 2010), p. 102. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-F/SPO-112.
1078	Ralston, Stephen, Donald E. Pearson, John C. Field, and Meisha Key. 2010. Documentation of the California catch reconstruction project. NOAA Technical Memorandum NMFS-SWFSC-461. 80 p.
925	Ruegg, Kristen, Eric C. Anderson, C. Scott Baker, Murdoch Vant, Jennifer A. Jackson, and Stephen R. Palumbi. 2010. Are Antarctic minke whales unusually abundant because of 20th century whaling? Molecular Ecology 19(2):281-291.
1081	Satterthwaite, William H., Michael P. Beakes, Erin M. Collins, David R. Swank, Joseph E. Merz, Robert G. Titus, Susan M. Sogard, and Marc Mangel. 2010. State-dependent life history models in a changing (and regulated) environment: steelhead in the California Central Valley. Evolutionary Applications 3(3):221-243.
1074	Simon, Christopher A., William H. Satterthwaite, Michael P. Beakes, Erin Collins, David R. Swank, Joseph E. Merz, Robert G. Titus, Susan M. Sogard, and Marc Mangel. 2010. Individual and population level variation in growth parameters for steelhead trout Oncorhynchus mykiss in central California. University of California, Santa Cruz, School of Engineering Technical Report UCSC-SOE-10-31. 30 p.
1199	Sogard, Susan, John Field, and Chris Harvey. 2010. An evaluation of the significance of climate forcing on time-varying growth and fecundity of rockfish in the California Current (Year 1 of 2 progress report). Report to NOAA Fisheries and the Environment (FATE) program, Project 09-09. NOAA National Marine Fisheries Service, Silver Spring, Maryland. 12 p.
845	Spence, Brian C., and James D. Hall. 2010. Spatiotemporal patterns in migration timing of coho salmon (Oncorhynchus kisutch) smolts in North America. Canadian Journal of Fisheries and Aquatic Sciences 67(8):1316-1334.
1107	Stillwater Sciences, Rosi Dagit, and John Carlos Garza. 2010. Lifecycle monitoring of O. mykiss in Topanga Creek, California: Final report. Prepared for California Department of Fish and Game, Contract No. P0750021. 198 p.
1041	Struve, Juliane, Kai Lorenzen, Julia Blanchard, Luca Borger, Nils Bunnefeld, Charles Edwards, Joaquin Hortal, Alec MacCall, Jason Matthiopoulos, Bram Van Moorter, Arpat Ozgul, Francois Royer, Navinder Singh, Chris Yesson, and Rodolphe Bernard. 2010. Lost in space? Searching for directions in the spatial modelling of individuals, populations and species ranges. Biology Letters 6(5):575-578.
1083	Thomson, Cynthia J. 2010. Data requirements for integrating socioeconomic considerations into regulatory analysis: examples from California commercial fisheries. In: Managing data-poor fisheries: case studies, models and solutions (1-4 December 2008, Berkeley, California), p. 307-326. California Sea Grant College Program.
876	Tomberlin, David, and Garth Holloway. 2010. Bayesian hierarchical estimation of technical efficiency in a fishery. Applied Economics Letters 17(2):201-204.
1177	Walter, John F., Stephen Ralston, and Terill Hollweg 2010. Joint Session Breakout 1B: Using habitat information in survey design and analysis, diadromous/estuarine dependent/reef & untrawlable groups. In: Kristan Blackhart (ed.), Proceedings: 11th National Stock Assessment Workshop: Characterization of scientific uncertainty in assessments to improve determination of acceptable biological catches (ABCs); Joint Session of the National Stock and Habitat Assessment Workshops: Incorporating habitat information in stock assessments; and 1st National Habitat Assessment Workshop: Moving towards a national habitat science program (St. Petersburg, Florida, May 17-20, 2010), p. 28-30. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-F/SPO-112.
984	Watters, D. L., M. M. Yoklavich, M. S. Love, and D. M. Schroeder. 2010. Assessing marine debris in deep seafloor habitats off California. Marine Pollution Bulletin 60(1):131-138.
1180	Wells, Brian 2010. Pelagic habitats and ecosystem considerations for salmon and other pelagics of the central coast of California [abstract]. In: Kristan Blackhart (ed.), Proceedings: 11th National Stock Assessment Workshop: Characterization of scientific uncertainty in assessments to improve determination of acceptable biological catches (ABCs); Joint Session of the National Stock and Habitat Assessment Workshops: Incorporating habitat information in stock assessments; and 1st National Habitat Assessment Workshop: Moving towards a national habitat science program (St. Petersburg, Florida, May 17-20, 2010), p. 144. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-F/SPO-112.
1040	Yoklavich, M., K. Blackhart, S. K. Brown, C. Greene, T. Minello, T. Noji, M. Parke, F. Parrish, K. Smith, R. Stone, and W. W. Wakefield. 2010. Marine fisheries habitat assessment improvement plan: Report of the National Marine Fisheries Service Habitat Assessment Improvement Plan Team. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-F/SPO-108. 115 p.
1182	Yoklavich, Mary M. 2010. Developing and implementing the Habitat Assessment Improvement Plan [abstract]. In: Kristan Blackhart (ed.), Proceedings: 11th National Stock Assessment Workshop: Characterization of scientific uncertainty in assessments to improve determination of acceptable biological catches (ABCs); Joint Session of the National Stock and Habitat Assessment Workshops: Incorporating habitat information in stock assessments; and 1st National Habitat Assessment Workshop: Moving towards a national habitat science program (St. Petersburg, Florida, May 17-20, 2010), p. 92. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-F/SPO-112.
1183	Yoklavich, Mary M., and Victoria O'Connell 2010. Habitat-specific survey methods to improve assessments of rockfishes off California and Alaska [abstract]. In: Kristan Blackhart (ed.), Proceedings: 11th National Stock Assessment Workshop: Characterization of scientific uncertainty in assessments to improve determination of acceptable biological catches (ABCs); Joint Session of the National Stock and Habitat Assessment Workshops: Incorporating habitat information in stock assessments; and 1st National Habitat Assessment Workshop: Moving towards a national habitat science program (St. Petersburg, Florida, May 17-20, 2010), p. 112. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-F/SPO-112.
1181	Yoklavich, Mary M., Michael Parke, and Joe Nohner 2010. NHAW Session 3 Breakout: How to implement the proposed solutions in the Southwest and Pacific Island Regions. In: Kristan Blackhart (ed.), Proceedings: 11th National Stock Assessment Workshop: Characterization of scientific uncertainty in assessments to improve determination of acceptable biological catches (ABCs); Joint Session of the National Stock and Habitat Assessment Workshops: Incorporating habitat information in stock assessments; and 1st National Habitat Assessment Workshop: Moving towards a national habitat science program (St. Petersburg, Florida, May 17-20, 2010), p. 72-73. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-F/SPO-112.
11	Yoklavich, Mary, and Elizabeth Clarke. 2010. Deep sea corals and benthic habitat surveys in and around Channel Islands National Marine Sanctuary. Cruise report, NOAA McArthur M2-10-02: Leg 3, 27 June - 02 July 2010. U.S. NOAA National Marine Fisheries Service, Santa Cruz, California. 7 p.
314	Anderson, E. C. 2009. Statistical methods for identifying hybrids and groups. In: G. Bertorelle, et al. (eds.), Population genetics for animal conservation, p. 25-41. Cambridge University Press.
276	Anderson, E. C., and J. C. Garza. 2009. Estimation of population size with molecular genetic data. NOAA Technical Memorandum NMFS-SWFSC-448. 57 p.
917	Anderson, Tara J., Craig Syms, Dale A. Roberts, and Daniel F. Howard. 2009. Multi-scale fish-habitat associations and the use of habitat surrogates to predict the organisation and abundance of deep-water fish assemblages. Journal of Experimental Marine Biology and Ecology 379(1-2):34-42.
1013	Baltz, K. 2009. Cruise report, NOAA Ship David Starr Jordan DS-08-03, May 4 - June 18, 2008: Rockfish recruitment assessment, Fisheries Ecology Division, NOAA NMFS SWFSC. National Marine Fisheries Service, Santa Cruz, California. 22 p.
462	Benet, D. L., E. J. Dick, and D. E. Pearson 2009. Life history aspects of greenspotted rockfish (Sebastes chlorostictus) from central California. NOAA Technical Memorandum NMFS-SWFSC-446. 43 p.
944	Botsford, L. W., D. R. Brumbaugh, C. Grimes, J. B. Kellner, J. Largier, M. R. O'Farrell, S. Ralston, E. Soulanille, and V. Wespestad. 2009. Connectivity, sustainability, and yield: bridging the gap between conventional fisheries management and marine protected areas. Reviews in Fish Biology and Fisheries 19(1):69-95.
903	Boughton, D. A., H. Fish, J. Pope, and G. Holt. 2009. Spatial patterning of habitat for Oncorhynchus mykiss in a system of intermittent and perennial streams. Ecology of Freshwater Fish 18(1):92-105.
956	Checkley, D. M., Jr., A. Bakun, M. Barange, L. R. Castro, P. Fréon, R. Guevara-Carrasco, S. F. Herrick, Jr., Alec D. MacCall, R. Ommer, Y. Oozeki, C. Roy, L. Shannon, and C. D. van der Lingen. 2009. Synthesis and perspective. In: D. Checkley et al. (eds.), Climate change and small pelagic fish, p. 344-351. Cambridge University Press.
979	Chute, A., L. Jacobson, P. Rago, and A. MacCall. 2009. Deep sea red crab. In: The Northeast Data Poor Stocks Working Group report (December 8-12, 2008 meeting), part A: Skate species complex, deep sea red crab, Atlantic wolfish, scup, and black sea bass, p. 181-214. NOAA National Marine Fisheries Service, Northeast Fisheries Science Center Reference Document 09-02a.
911	Clemento, A. J., E. C. Anderson, D. Boughton, D. Girman, and J. C. Garza. 2009. Population genetic structure and ancestry of Oncorhynchus mykiss populations above and below dams in south-central California. Conservation Genetics 10(5):1321-1336.
1057	Cook, Robin, Xi He, Jean-Jacques Maguire, and Theresa Tsou. 2009. Petrale sole STAR Panel report. In: Status of the Pacific coast groundfish fishery through 2009, stock assessment and fishery evaluation: Stock assessments, STAR Panel reports, and rebuilding analyses. Pacific Fishery Management Council, Portland, Oregon. 8 p.
1058	Cook, Robin, Xi He, Jean-Jacques Maguire, and Theresa Tsou. 2009. Splitnose rockfish STAR Panel report. In: Status of the Pacific coast groundfish fishery through 2009, stock assessment and fishery evaluation: Stock assessments, STAR Panel reports, and rebuilding analyses. Pacific Fishery Management Council, Portland, Oregon. 5 p.
1073	Costa, Daniel P., Yann Tremblay, and Sean Hayes. 2009. Research on higher trophic levels. In: D. Glickson (ed.), Oceanography in 2025: proceedings of a workshop, p. 124-129. National Academies Press, Washington, D.C.
982	Dick, E. J., S. Ralston, D. Pearson, and J. Wiedenmann. 2009. Updated status of cowcod, Sebastes levis, in the Southern California Bight. In: Status of the Pacific coast groundfish fishery through 2009, stock assessment and fishery evaluation: Stock assessments, STAR Panel reports, and rebuilding analyses. Pacific Fishery Management Council, Portland, Oregon. 55 p.
1051	Dick, E.J., and Stephen Ralston. 2009. Cowcod rebuilding analysis. In: Status of the Pacific coast groundfish fishery through 2009, stock assessment and fishery evaluation: Stock assessments, STAR Panel reports, and rebuilding analyses. Pacific Fishery Management Council, Portland, Oregon. 32 p.
1061	Dick, E.J., Anne Allen, and John Field (eds.), Carlos Garza, John Hyde, David Demer, Cynthia Thomson, William Watson, and Mary Yoklavich. 2009. NMFS Southwest Fisheries Science Center: Draft agency report to the Technical Subcommittee of the Canada-U.S. Groundfish Committee. In: Report of the Technical Subcommittee of the Canada-United States Groundfish Committee: Fiftieth annual meeting of the TSC (May 5-6, 2009, Juneau, Alaska), p. 214-230. Pacific States Marine Fisheries Commission, Portland, Oregon.
1053	Field, John C., and Xi He. 2009. Bocaccio rebuilding analysis for 2009. In: Status of the Pacific coast groundfish fishery through 2009, stock assessment and fishery evaluation: Stock assessments, STAR Panel reports, and rebuilding analyses. Pacific Fishery Management Council, Portland, Oregon. 17 p.
1052	Field, John C., E.J. Dick, Don Pearson, and Alec D. MacCall. 2009. Status of bocaccio, Sebastes paucispinis, in the Conception, Monterey and Eureka INPFC areas for 2009. In: Status of the Pacific coast groundfish fishery through 2009, stock assessment and fishery evaluation: Stock assessments, STAR Panel reports, and rebuilding analyses. Pacific Fishery Management Council, Portland, Oregon. 255 p.
1065	Fréon, Pierre, Javier Arístegui, Arnaud Bertrand, Robert J.M. Crawford, John C. Field, Mark J. Gibbons, Jorge Tam, Larry Hutchings, Hicham Masski, Christian Mullon, Mohamed Ramdani, Bernard Seret, and Monique Simier. 2009. Functional group biodiversity in Eastern Boundary Upwelling Ecosystems questions the wasp-waist trophic structure. Progress in Oceanography 83(1-4):97-106.
904	Fujiwara, M. 2009. Environmental stochasticity. In: Encyclopedia of Life Sciences. John Wiley & Sons, Chichester. 7 p.
860	Fujiwara, M., and M. S. Mohr. 2009. Identifying environmental signals from population abundance data using multivariate time-series analysis. Oikos 118(11):1712-1720.
1054	Gertseva, Vladlena V., Jason M. Cope, and Donald E. Pearson. 2009. Status of the U.S. splitnose rockfish (Sebastes diploproa) resource in 2009. In: Status of the Pacific coast groundfish fishery through 2009, stock assessment and fishery evaluation: Stock assessments, STAR Panel reports, and rebuilding analyses. Pacific Fishery Management Council, Portland, Oregon. 272 p.
186	Hankin, D. G., M. S. Mohr, and H. Voight. 2009. Estimating the proportions of closely related species: performance of the two-phase ratio estimator. Journal of Agricultural, Biological, and Environmental Statistics 14(1):15-32.
990	Hannesson, R., S. Herrick, Jr., and J. Field. 2009. Ecological and economic considerations in the conservation and management of the Pacific sardine (Sardinops sagax). Canadian Journal of Fisheries and Aquatic Sciences 66(5):859-868.
1050	He, Xi, Andre Punt, Alec D. MacCall, and Stephen Ralston. 2009. Rebuilding analysis for widow rockfish in 2009. In: Status of the Pacific coast groundfish fishery through 2009, stock assessment and fishery evaluation: Stock assessments, STAR Panel reports, and rebuilding analyses. Pacific Fishery Management Council, Portland, Oregon. 19 p.
1049	He, Xi, Donald E. Pearson, E.J. Dick, John C. Field, Stephen Ralston, and Alec D. MacCall. 2009. Status of the widow rockfish resource in 2009. In: Status of the Pacific coast groundfish fishery through 2009, stock assessment and fishery evaluation: Stock assessments, STAR Panel reports, and rebuilding analyses. Pacific Fishery Management Council, Portland, Oregon. 187 p.
921	Heublein, J. C., J. T. Kelly, C. E. Crocker, A. P. Klimley, and S. T. Lindley. 2009. Migration of green sturgeon, Acipenser medirostris, in the Sacramento River. Environmental Biology of Fishes 84(3):245-258.
681	Israel, J. A., K. J. Bando, E. C. Anderson, and B. May. 2009. Polyploid microsatellite data reveal stock complexity among estuarine North American green sturgeon (Acipenser medirostris). Canadian Journal of Fisheries and Aquatic Sciences 66(9):1491-1504.
949	Kaplan, D. M., L. W. Botsford, M. R. O'Farrell, S. D. Gaines, and S. Jorgensen. 2009. Model-based assessment of persistence in proposed marine protected area designs. Ecological Applications 19(2):433-448.
1101	Klamath River Technical Advisory Team. 2009. Klamath River fall Chinook age-specific escapement, river harvest, and run size estimates, 2008 run. Klamath River Technical Advisory Team. 20 p.
1098	Klamath River Technical Advisory Team. 2009. Ocean abundance projections and prospective harvest levels for Klamath River fall Chinook, 2009 season. Klamath River Technical Advisory Team. 31 p.
962	Laidig, T. E., D. L. Watters, and M. M. Yoklavich. 2009. Demersal fish and habitat associations from visual surveys on the central California shelf. Estuarine, Coastal and Shelf Science 83(4):629-637.
920	Lindley, S. T., C. B. Grimes, M. S. Mohr, W. Peterson, J. Stein, J. T. Anderson, L. W. Botsford, D. L. Bottom, C. A. Busack, T. K. Collier, J. Ferguson, J. C. Garza, A. M. Grover, D. G. Hankin, R. G. Kope, P. W. Lawson, A. Low, R. B. MacFarlane, K. Moore, M. Palmer-Zwahlen, F. B. Schwing, J. Smith, C. Tracy, R. Webb, B. K. Wells, and T. H. Williams. 2009. What caused the Sacramento River fall Chinook stock collapse? Pre-publication report to the Pacific Fishery Management Council, March 18, 2009. 118 p.
996	Lindley, S.T., C.B. Grimes, M.S. Mohr, W. Peterson, J. Stein, J.T. Anderson, L.W. Botsford, D.L. Bottom, C.A. Busack, T.K. Collier, J. Ferguson, J.C. Garza, A.M. Grover, D.G. Hankin, R.G. Kope, P.W. Lawson, A. Low, R.B. MacFarlane, K. Moore, M. Palmer-Zwahlen, F.B. Schwing, J. Smith, C. Tracy, R. Webb, B.K. Wells, and T.H. Williams. 2009. What caused the Sacramento River fall Chinook stock collapse? NOAA Technical Memorandum NMFS-SWFSC-447. 121 p.
906	Love, M. S., M. Yoklavich, and D. M. Schroeder. 2009. Demersal fish assemblages in the Southern California Bight based on visual surveys in deep water. Environmental Biology of Fishes 84(1):55-68.
855	MacCall, A. D. 2009. A short scientific history of the fisheries. In: D. Checkley et al. (eds.), Climate change and small pelagic fish, p. 6-11. Cambridge University Press.
854	MacCall, A. D. 2009. Mechanisms of low-frequency fluctuations in sardine and anchovy populations. In: D. Checkley et al. (eds.), Climate change and small pelagic fish, p. 285-299. Cambridge University Press.
932	MacCall, A.D. 2009. Depletion-corrected average catch: a simple formula for estimating sustainable yields in data-poor situations. ICES Journal of Marine Science 66(10):2267-2271.
1026	McClatchie, S., R. Goericke, F. B. Schwing, S. J. Bograd, W. T. Peterson, R. Emmett, R. Charter, W. Watson, N. Lo, K. Hill, C. Collins, M. Kahru, B. G. Mitchell, J. A. Koslow, J. Gomez-Valdes, B. E. Lavaniegos, G. Gaxiola-Castro, J. Gottschalck, M. L'Heureux, Y. Xue, M. Manzano-Sarabia, E. Bjorkstedt, S. Ralston, J. Field, L. Rogers-Bennet, L. Munger, G. Campbell, K. Merkens, D. Camacho, A. Havron, A. Douglas, and J. Hildebrand. 2009. The state of the California Current, Spring 2008-2009: cold conditions drive regional differences in coastal production. CalCOFI Reports 50:43-68.
1092	Moffitt, Elizabeth A., Louis W. Botsford, David M. Kaplan, and Michael R. O'Farrell. 2009. Marine reserve networks for species that move within a home range. Ecological Applications 19(7):1835-1847.
919	Mora, E. A., S. T. Lindley, D. L. Erickson, and A. P. Klimley. 2009. Do impassable dams and flow regulation constrain the distribution of green sturgeon in the Sacramento River, California? Journal of Applied Ichthyology 25(Suppl. 2):39-47.
980	National Marine Fisheries Service. 2009. Report to Congress: The state of science to support an ecosystem approach to regional fishery management: Pursuant to the Magnuson-Stevens Fishery Conservation and Management Act, Section 406. NOAA Technical Memorandum NMFS-F/SPO-96. 17 p.
1021	Newman, Ken B., Pete Smith, Pete Adams, Randy Baxter, Mike Chotkowski, and Steve Culberson. 2009. Scientific and statistical review of Appendix C, Scientific investigation program & monitoring plan, final administrative draft of biological assessment, 2-Gates Fish Protection Demonstration Project. Report to the U.S. Fish and Wildlife Service, Sacramento, California. 15 p.
964	O'Farrell, M. R., M. M. Yoklavich, and M. S. Love. 2009. Assessment of habitat and predator effects on dwarf rockfishes (Sebastes spp.) using multi model inference. Environmental Biology of Fishes 85(3):239-250.
939	Pacific Fishery Management Council (Salmon Technical Team). 2009. Preseason report I: Stock abundance analysis for 2009 ocean salmon fisheries. Pacific Fishery Management Council, Portland, Oregon. 100 p.
951	Pacific Fishery Management Council (Salmon Technical Team). 2009. Preseason report II: Analysis of proposed regulatory options for 2009 ocean salmon fisheries. Pacific Fishery Management Council, Portland, Oregon. 42 p.
953	Pacific Fishery Management Council (Salmon Technical Team). 2009. Preseason report III: Analysis of Council adopted management measures for 2009 ocean salmon fisheries. Pacific Fishery Management Council, Portland, Oregon. 36 p.
942	Pacific Fishery Management Council (Salmon Technical Team). 2009. Review of 2008 ocean salmon fisheries. Pacific Fishery Management Council, Portland, Oregon. 325 p.
1064	Patrick, W.S., P. Spencer, O. Ormseth, J. Cope, J. Field. D. Kobayashi, T. Gedamke, E. Cortés, K. Bigelow, W. Overholtz, J. Link, and P. Lawson. 2009. Using productivity and susceptibility indices to determine stock vulnerability, with example applications to six U.S. fisheries. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-F/SPO-101. 90 p.
948	Pearse, D. E., and E. C. Anderson. 2009. Multiple paternity increases effective population size. Molecular Ecology 18(15):3124-3127.
764	Pearse, D. E., S. A. Hayes, M. H. Bond, C. V. Hanson, E. C. Anderson, R. B. MacFarlane, and J. C. Garza. 2009. Over the falls? Rapid evolution of ecotypic differentiation in steelhead/rainbow trout (Oncorhynchus mykiss). Journal of Heredity 100(5):515-525.
1047	Punt, André, Owen Hamel, Gary Melvin, Alec MacCall, and Ken Burnham. 2009. Aerial survey methods for Pacific sardine: Report of STAR Panel meeting. In: June 2009 Briefing Book, agenda item H.2.a, attachment 3. Pacific Fishery Management Council, Portland, Oregon. 14 p.
1048	Punt, André, Owen Hamel, Gary Melvin, Alec MacCall, and Ken Burnham. 2009. Pacific mackerel: draft STAR Panel meeting report. In: Status of the Pacific Coast coastal pelagic species fishery and recommended acceptable biological catches: Stock assessment and fishery evaluation 2009. Appendix 2: 2009 Pacific mackerel stock assessment, Stock Assessment Review Panel report, Scientific and Statistical Committee report, and CPS Management Team and Advisory Subpanel reports. Pacific Fishery Management Council, Portland, Oregon. 17 p.
1055	Ralston, Stephen, Richard Methot, Vivian Haist, and J.J. Maguire. 2009. Greenstriped rockfish STAR Panel report. In: Status of the Pacific coast groundfish fishery through 2009, stock assessment and fishery evaluation: Stock assessments, STAR Panel reports, and rebuilding analyses. Pacific Fishery Management Council, Portland, Oregon. 9 p.
1056	Ralston, Stephen, Richard Methot, Vivian Haist, and J.J. Maguire. 2009. Yelloweye rockfish STAR Panel report. In: Status of the Pacific coast groundfish fishery through 2009, stock assessment and fishery evaluation: Stock assessments, STAR Panel reports, and rebuilding analyses. Pacific Fishery Management Council, Portland, Oregon. 10 p.
968	Renfree, J. S., S. A. Hayes, and D. A. Demer. 2009. Sound-scattering spectra of steelhead (Oncorhynchus mykiss), coho (O. kisutch), and Chinook (O. tshawytscha) salmonids. In: David A. Demer and David N. MacLennan (eds.), The ecosystem approach with fisheries acoustics and complementary technologies: Selected papers of an ICES Symposium (Bergen, Norway, 16-20 June 2008). ICES Journal of Marine Science 66(6):1091-1099.
879	Rundio, D. E. 2009. Community-habitat relationships in coastal streams in Big Sur, California, USA: travertine influences macroinvertebrate abundance and community structure. Hydrobiologia 620(1):91-108.
969	Satterthwaite, William H., Michael P. Beakes, Erin M. Collins, David R. Swank, Joseph E. Merz, Robert G. Titus, Susan M. Sogard, and Marc Mangel. 2009. Steelhead life history on California's central coast: insights from a state-dependent model. Transactions of the American Fisheries Society 138(3):532-548.
704	Schick, R. S., and M. E. Lutcavage. 2009. Inclusion of prey data improves prediction of bluefin tuna (Thunnus thynnus) distribution. Fisheries Oceanography 18(1):77-81.
1024	Schwing, F., and S. Lindley. 2009. Climate change in California: implications for the recovery and protection of Pacific salmon and steelhead. NOAA Technical Memorandum NMFS-SWFSC-451. [Note: Not yet available.]
1201	Schwing, Frank, Eric Danner, Steve Lindley, Roy Mendelssohn, Jim Overland, Steve Ralston, Bruno Sanso, and Muyin Wang. 2009. Developing statistically robust IPCC climate model products for estuarine-dependent and anadromous fish stock assessments. Report to NOAA Fisheries and the Environment (FATE) program, Project 08-06. NOAA National Marine Fisheries Service, Silver Spring, Maryland. 5 p.
884	Sogard, S. M., T. H. Williams, and H. Fish. 2009. Seasonal patterns of abundance, growth, and site fidelity of juvenile steelhead in a small coastal California stream. Transactions of the American Fisheries Society 138(3):549–563.
981	Sturm, E. A., E. A. Gilbert-Horvath, J. C. Garza, and R. B. MacFarlane. 2009. Creation of a captive broodstock program for southern coho salmon (Oncorhynchus kisutch): results from the initial rearing and spawning of the first brood year. NOAA Technical Memorandum NMFS-SWFSC-436. 66 p.
1025	Sydeman, W. J., K. L. Mills, J. A. Santora, S. A. Thompson, D. F. Bertram, K. H. Morgan, J. M. Hipfner, B. K. Wells, and S. G. Wolf. 2009. Seabirds and climate in the California Current: a synthesis of change. CalCOFI Reports 50:82-104.
1202	Sydeman, William, Alec MacCall, Kyra Mills, Frank Schwing, Steven Bograd, Chet Grosch, and Julie Thayer. 2009. Integrating indicators: Co-variation, periodicity and amplitude of key biological signals from central Oregon and northern California. Report to NOAA Fisheries and the Environment (FATE) program, Project 08-07. NOAA National Marine Fisheries Service, Silver Spring, Maryland. 1 p.
908	Wiedenmann, John, Masami Fujiwara, and Marc Mangel. 2009. Transient population dynamics and viable stage or age distributions for effective conservation and recovery. Biological Conservation 142(12):2990-2996.
902	Aguilar, A., D. A. Jessup, J. Estes, and J. C. Garza. 2008. The distribution of nuclear genetic variation and historical demography of sea otters. Animal Conservation 11(1):35-45.
900	Aguilar, Andres, and John Carlos Garza. 2008. Isolation of 15 single nucleotide polymorphisms from coastal steelhead, Oncorhynchus mykiss (Salmonidae). Molecular Ecology Resources 8(3):659-662.
895	Alonzo, S. H., T. Ish, M. Key, A. D. MacCall, and M. Mangel. 2008. The importance of incorporating protogynous sex change into stock assessments. Bulletin of Marine Science 83(1):163-179.
703	Anderson, E. C., R. S. Waples, and S. T. Kalinowski. 2008. An improved method for predicting the accuracy of genetic stock identification. Canadian Journal of Fisheries and Aquatic Sciences 65(7):1475-1486.
887	Anderson, E.C., and K.K. Dunham. 2008. The influence of family groups on inferences made with the program Structure. Molecular Ecology Resources 8(6):1219-1229.
880	Anderson, Eric C. 2008. Bayesian inference of species hybrids using multilocus dominant genetic markers. Philosophical Transactions of the Royal Society B: Biological Sciences 363(1505):2841-2850.
886	Baltz, K. 2008. Cruise report, NOAA Ship David Starr Jordan DS-07-03, May 4 - June 17, 2007: Rockfish recruitment assessment, Fisheries Ecology Division, NOAA NMFS SWFSC. National Marine Fisheries Service, Santa Cruz, California. 25 p. (Author not specified in document.)
5	Barnett-Johnson, R., T. E. Pearson, F. C. Ramos, C. B. Grimes, and R. B. MacFarlane. 2008. Tracking natal origins of salmon using isotopes, otoliths, and landscape geology. Limnology and Oceanography 53(4):1633-1642.
853	Bond, M. H., S. A. Hayes, C. V. Hanson, and R. B. MacFarlane. 2008. Marine survival of steelhead (Oncorhynchus mykiss) enhanced by a seasonally closed estuary. Canadian Journal of Fisheries and Aquatic Sciences 65(10):2242-2252.
848	Bonine, Kimberly M., Eric P. Bjorkstedt, Katherine C. Ewel, and Moses Palik. 2008. Population characteristics of the mangrove crab Scylla serrata (Decapoda: Portunidae) in Kosrae, Federated States of Micronesia: effects of harvest and implications for management. Pacific Science 62(1):1-19.
926	Connolly, P. J., T. H. Williams, and R. E. Gresswell (eds.). 2008. The 2005 Coastal Cutthroat Trout Symposium: status, management, biology, and conservation (September 29-October 1, 2005, Port Townsend, Washington). American Fisheries Society, Oregon Chapter.
893	Cowan, J. H., C. B. Grimes, and R. F. Shaw. 2008. Life history, history, hysteresis, and habitat changes in Louisiana's coastal ecosystem. Bulletin of Marine Science 83(1):197-215.
918	Cummins, K., C. Furey, A. Giorgi, S. Lindley, J. Nestler, and J. Shurts. 2008. Listen to the river: an independent review of the CVPIA fisheries program. Prepared under contract with Circlepoint for the U.S. Bureau of Reclamation and the U.S. Fish and Wildlife Service. 90 p.
897	Deas, M., P. Goodwin, S. Lindley, C. Woodley, and T. Williams. 2008. Temperature management and modeling workshop in support of an Operations Criteria and Plan biological assessment and biological opinion (April 1, 2008). Report prepared for Michael Healey, CALFED Lead Scientist. CALFED Science Program. 20 p.	Additional information and presentation files
1006	Dick, E.J., and Stephen Ralston. 2008. Cowcod rebuilding analysis. In: Status of the Pacific coast groundfish fishery through 2008, stock assessment and fishery evaluation: Stock assessments, STAR Panel reports, and rebuilding analyses. Pacific Fishery Management Council, Portland, Oregon. 20 p.
1005	Dick, E.J., Stephen Ralston, and Don Pearson. 2008. Status of cowcod, Sebastes levis, in the Southern California Bight. In: Status of the Pacific coast groundfish fishery through 2008, stock assessment and fishery evaluation: Stock assessments, STAR Panel reports, and rebuilding analyses. Pacific Fishery Management Council, Portland, Oregon. (101 p.)
775	Donohoe, C. J., P. B. Adams, and C. F. Royer. 2008. Influence of water chemistry and migratory distance on ability to distinguish progeny of sympatric resident and anadromous rainbow trout (Oncorhynchus mykiss). Canadian Journal of Fisheries and Aquatic Sciences 65(6):1060-1075.
1003	Dorn, Martin, Stephen Ralston, Andre Punt, Thomas Helser, Owen Hamel, Tom Jagielo, and Patrick Cordue. 2008. Blue rockfish STAR Panel report. In: Status of the Pacific coast groundfish fishery through 2008, stock assessment and fishery evaluation: Stock assessments, STAR Panel reports, and rebuilding analyses. Pacific Fishery Management Council, Portland, Oregon. 14 p.
1002	Dorn, Martin, Stephen Ralston, Andre Punt, Thomas Helser, Owen Hamel, Tom Jagielo, and Patrick Cordue. 2008. Southern black rockfish STAR Panel report. In: Status of the Pacific coast groundfish fishery through 2008, stock assessment and fishery evaluation: Stock assessments, STAR Panel reports, and rebuilding analyses. Pacific Fishery Management Council, Portland, Oregon. 12 p.
950	Duffy, W. G., and E. P. Bjorkstedt. 2008. Demographics of coastal cutthroat trout Oncorhynchus clarkii clarkii in Prairie Creek, California. In: P. J. Connolly, T. H. Williams, and R. E. Gresswell (eds.), The 2005 Coastal Cutthroat Trout Symposium: status, management, biology, and conservation, p. 100-106. American Fisheries Society, Oregon Chapter.
896	Elsdon, T. S., B. K. Wells, S. E. Campana, B. M. Gillanders, C. M. Jones, K. E. Limburg, D. H. Secor, S. R. Thorrold, and B. D. Walther. 2008. Otolith chemistry to describe movements and life-history parameters of fishes: hypotheses, assumptions, limitations and inferences. Oceanography and Marine Biology: An Annual Review 46:297-330.
922	Field, J. 2008. Jumbo squid (Dosidicus gigas) invasions in the eastern Pacific Ocean [Symposium introduction]. CalCOFI Reports 49:79-81.
1060	Field, John (ed.), David Demer, John Hyde, and William Watson. 2008. NMFS Southwest Fisheries Science Center: Agency report to the Technical Subcommittee of the Canada-U.S. Groundfish Committee. In: Report of the Technical Subcommittee of the Canada-United States Groundfish Committee: Forty-ninth annual meeting of the TSC (May 6-7, 2008, Seattle, Washington), p. 230-245. Pacific States Marine Fisheries Commission, Portland, Oregon.
1007	Field, John C. 2008. Status of the chilipepper rockfish, Sebastes goodei, in 2007. In: Status of the Pacific coast groundfish fishery through 2008, stock assessment and fishery evaluation: Stock assessments, STAR Panel reports, and rebuilding analyses. Pacific Fishery Management Council, Portland, Oregon. 226 p.
861	Fujiwara, M. 2008. Effects of an autocorrelated stochastic environment and fisheries on the age at maturity of Chinook salmon. Theoretical Ecology 1(2):89-101.
863	Fujiwara, M. 2008. Identifying interactions among salmon populations from observed dynamics. Ecology 89(1):4-11.
993	Garza, J. C., and D. E. Pearse. 2008. Population genetic structure of Oncorhynchus mykiss in the California Central Valley. Final report for California Department of Fish and Game Contract #PO485303 with University of California, Santa Cruz and NOAA Southwest Fisheries Science Center, 110 Shaffer Rd. Santa Cruz, CA 95060. 54 p.
1109	Garza, John Carlos, and Anthony Clemento. 2008. Population genetic structure of Oncorhynchus mykiss in the Santa Ynez River, California. Final report for contract with the Cachuma Conservation Release Board. 55 p.
1108	Garza, John Carlos, and Devon Pearse. 2008. Population genetics of Oncorhynchus mykiss in the Santa Clara Valley Region. Final report to the Santa Clara Valley Water District (SCVWD). 53 p.
1110	Garza, John Carlos, Scott M. Blankenship, Christophe Lemaire, and Gregory Charrier. 2008. Genetic population structure of Chinook salmon (Oncorhynchus tshawytscha) in California's Central Valley. Final report for CalFed Project "Comprehensive evaluation of population structure and diversity for Central Valley Chinook salmon". University of California, Santa Cruz, Institute of Marine Sciences, and NOAA Southwest Fisheries Science Center, Santa Cruz, California. 80 p.
756	Goin, J. J., T. H. Williams, and C. J. Donohoe. 2008. Variation of vertebral number in juvenile Oncorhynchus mykiss in relation to upstream distance from the ocean. Environmental Biology of Fishes 82(3):207-213.
947	Grober-Dunsmore, R., L. Wooninck, J. Field, C. Ainsworth, J. Beets, S. Berkeley, J. Bohnsack, R. Boulon, R. Brodeur, J. Brodziak, L. Crowder, D. Gleason, M. Hixon, L. Kaufman, B. Lindberg, M. Miller, L. Morgan, and C. Wahle. 2008. Vertical zoning in marine protected areas: ecological considerations for balancing pelagic fishing with conservation of benthic communities. Fisheries 33(12):598-610.
846	Hayes, S. A., M. H. Bond. C. V. Hanson, E. V. Freund, J. J. Smith, E. C. Anderson, A. J. Ammann, and R. B. MacFarlane. 2008. Steelhead growth in a small central California watershed: upstream and estuarine rearing patterns. Transactions of the American Fisheries Society 137(1):114-128.
970	He, X., A. Punt, A. D. MacCall, and S. Ralston. 2008. Rebuilding analysis for widow rockfish in 2007 – an update. In: Status of the Pacific coast groundfish fishery through 2008, stock assessment and fishery evaluation: Stock assessments, STAR Panel reports, and rebuilding analyses. Pacific Fishery Management Council, Portland, Oregon. 17 p.
971	He, X., D. E. Pearson, E. J. Dick, J. C. Field, S. Ralston, and A. D. MacCall. 2008. Status of the widow rockfish resource in 2007: an update. In: Status of the Pacific coast groundfish fishery through 2008, stock assessment and fishery evaluation: Stock assessments, STAR Panel reports, and rebuilding analyses. Pacific Fishery Management Council, Portland, Oregon. 92 p.
974	Key, M., A. D. MacCall, J. Field, D. Aseltine-Neilson, and K. Lynn. 2008. The 2007 assessment of blue rockfish (Sebastes mystinus) in California. In: Status of the Pacific coast groundfish fishery through 2008, stock assessment and fishery evaluation: Stock assessments, STAR Panel reports, and rebuilding analyses. Pacific Fishery Management Council, Portland, Oregon. 155 p.
916	Kinziger, A. P., E. J. Loudenslager, D. G. Hankin, E. C. Anderson, and J. C. Garza. 2008. Hybridization between spring- and fall-run Chinook salmon returning to the Trinity River, California. North American Journal of Fisheries Management 28(5):1426-1438.
1100	Klamath River Technical Advisory Team. 2008. Klamath River fall Chinook age-specific escapement, river harvest, and run size estimates, 2007 run. Klamath River Technical Advisory Team. 17 p.
1097	Klamath River Technical Advisory Team. 2008. Ocean abundance projections and prospective harvest levels for Klamath River fall Chinook, 2008 season. Klamath River Technical Advisory Team. 28 p.
843	Laidig, T. E., K. M. Sakuma, J. R. Hyde, W. Watson, and C. Taylor Lawley. 2008. Identification, description, and daily growth of pelagic larval and juvenile squarespot rockfish, Sebastes hopkinsi (Family Sebastidae). CalCOFI Reports 49:212-221.
620	Lindley, S. T., M. L. Moser, D. L. Erickson, M. Belchik, D. W. Welch, E. L. Rechisky, J. T. Kelly, J. Heublein, and A. P. Klimley. 2008. Marine migration of North American green sturgeon. Transactions of the American Fisheries Society 137(1):182-194.
1203	Lindley, Steve, Steve Ralston, and Eric Danner. 2008. Impact of freshwater and terrestrial ecosystem conditions on estuarine dependent and anadromous fish. Report to NOAA Fisheries and the Environment (FATE) program, Project 07-06. NOAA National Marine Fisheries Service, Silver Spring, Maryland. 1 p.
890	Love, M. S., and M. Yoklavich. 2008. Habitat characteristics of juvenile cowcod, Sebastes levis (Scorpaenidae), in Southern California. Environmental Biology of Fishes 82(2):195-202.
975	MacCall, A. D. 2008. Bocaccio rebuilding analysis for 2007. In: Status of the Pacific coast groundfish fishery through 2008, stock assessment and fishery evaluation: Stock assessments, STAR Panel reports, and rebuilding analyses. Pacific Fishery Management Council, Portland, Oregon. 13 p.
976	MacCall, A. D. 2008. Status of bocaccio off California in 2007. In: Status of the Pacific coast groundfish fishery through 2008, stock assessment and fishery evaluation: Stock assessments, STAR Panel reports, and rebuilding analyses. Pacific Fishery Management Council, Portland, Oregon. 67 p.
994	MacFarlane, R.B., S. Hayes, and B. Wells. 2008. Coho and Chinook salmon decline in California during the spawning seasons of 2007/08. 4 p.
882	Manoukis, N. C., and E. C. Anderson. 2008. GuiLiner: a configurable and extensible graphical user interface for scientific analysis and simulation software. arXiv:0806.0314v1 [cs.HC], 4 p. URL: http://arxiv.org/abs/0806.0314v1	Software
923	McClatchie, S., R. Goericke, J. A. Koslow, F. B. Schwing, S. J. Bograd, R. Charter, W. Watson, N. Lo, K. Hill, J. Gottschalck, M. L'Heureux, Y. Xue, W. T. Peterson, R. Emmett, C. Collins, G. Gaxiola-Castro, R. Durazo, M. Kahru, B. G. Mitchell, K. D. Hyrenbach, W. J. Sydeman, R. W. Bradley, P. Warzybok, and E. Bjorkstedt. 2008. The state of the California Current, 2007-2008: La Niña conditions and their effects on the ecosystem. CalCOFI Reports 49:39-76.
977	McClure, M. M., S. M. Carlson, T. J. Beechie, G. R. Pess, J. C. Jorgensen, S. M. Sogard, S. E. Sultan, D. M. Holzer, J. Travis, B. L. Sanderson, M. E. Power, and R. W. Carmichael. 2008. Evolutionary consequences of habitat loss for Pacific anadromous salmonids. Evolutionary Applications 1(2):300-318.
899	Narum, S. R., M. Banks, T. D. Beacham, M. R. Bellinger, M. R. Campbell, J. Dekoning, A. Elz, C. M. Guthrie III, C. Kozfkay, K. M. Miller, P. Moran, R. Phillips, L. W. Seeb, C. T. Smith, K. Warheit, S. F. Young, and J. C. Garza. 2008. Differentiating salmon populations at broad and fine geographical scales with microsatellites and single nucleotide polymorphisms. Molecular Ecology 17(15):3464-3477.
1089	Pacific Fishery Management Council (Klamath River Fall Chinook Assessment Workgroup). 2008. Assessment of factors affecting natural area escapement shortfall of Klamath River fall Chinook salmon in 2004-2006. Pacific Fishery Management Council, Portland, Oregon. 76 p.
936	Pacific Fishery Management Council (Salmon Technical Team). 2008. Preseason report I: Stock abundance analysis for 2008 ocean salmon fisheries. Pacific Fishery Management Council, Portland, Oregon. 101 p.
937	Pacific Fishery Management Council (Salmon Technical Team). 2008. Preseason report II: Analysis of proposed regulatory options for 2008 ocean salmon fisheries. Pacific Fishery Management Council, Portland, Oregon. 54 p.
938	Pacific Fishery Management Council (Salmon Technical Team). 2008. Preseason report III: Analysis of Council adopted management measures for 2008 ocean salmon fisheries. Pacific Fishery Management Council, Portland, Oregon. 35 p.
941	Pacific Fishery Management Council (Salmon Technical Team). 2008. Review of 2007 ocean salmon fisheries. Pacific Fishery Management Council, Portland, Oregon. 326 p.
1104	Pearse, Devon, and John Carlos Garza 2008. Historical baseline for genetic monitoring of coastal California steelhead, Oncorhynchus mykiss. Final report to California Department of Fish and Game, Fisheries Restoration Grant Program, Grant #P0510530. NOAA Fisheries Service, Santa Cruz, California. 31 p.
928	Pearson, D. E., B. Erwin, and M. Key. 2008. Reliability of California's groundfish landing estimates from 1969-2006. NOAA Technical Memorandum NMFS-SWFSC-431. 133 p.
978	Pomeroy, C., and M. M. Stevens. 2008. Santa Cruz Harbor commercial fishing community profile: California Fishing Communities Project. California Sea Grant, Publication no. T-066. 34 p.
838	Ralston, S., and M. R. O'Farrell. 2008. Spatial variation in fishing intensity and its effect on yield. Canadian Journal of Fisheries and Aquatic Sciences 65(4):588-599.
1011	Ralston, Steve, Patrick Cordue, Devorah Hart, Jim Ianelli, and Paul Medley. 2008. Arrowtooth flounder STAR Panel report. In: Status of the Pacific coast groundfish fishery through 2008, stock assessment and fishery evaluation: Stock assessments, STAR Panel reports, and rebuilding analyses. Pacific Fishery Management Council, Portland, Oregon. 12 p.
1010	Ralston, Steve, Patrick Cordue, Devorah Hart, Jim Ianelli, and Paul Medley. 2008. Canary rockfish STAR Panel report. In: Status of the Pacific coast groundfish fishery through 2008, stock assessment and fishery evaluation: Stock assessments, STAR Panel reports, and rebuilding analyses. Pacific Fishery Management Council, Portland, Oregon. 16 p.
988	Rice, A.M., D.E. Pearse, T. Becker, R.A. Newman, C. Lebonville, G.R. Harper, and K.S. Pfennig. 2008. Development and characterization of nine polymorphic microsatellite markers for Mexican spadefoot toads (Spea multiplicata) with cross-amplification in Plains spadefoot toads (S. bobmifrons). Molecular Ecology Resources 8(6):1386-1389.
802	Rundio, D. E., and S. T. Lindley. 2008. Seasonal patterns of terrestrial and aquatic prey abundance and use by Oncorhynchus mykiss in a California coastal basin with a Mediterranean climate. Transactions of the American Fisheries Society 137(2):467-480.
772	Sogard, S. M., E. Gilbert-Horvath, E. C. Anderson, R. Fisher, S. A. Berkeley, and J. C. Garza. 2008. Multiple paternity in viviparous kelp rockfish, Sebastes atrovirens. Environmental Biology of Fishes 81(1):7-13.
844	Sogard, S. M., S. A. Berkeley, and R. Fisher. 2008. Maternal effects in rockfishes Sebastes spp.: a comparison among species. Marine Ecology Progress Series 360:227-236.
885	Spence, B. C., E. P. Bjorkstedt, J. C. Garza, J. J. Smith, D. G. Hankin, D. Fuller, W. E. Jones, R. Macedo, T. H. Williams, E. Mora. 2008. A framework for assessing the viability of threatened and endangered salmon and steelhead in the North-Central California Coast Recovery Domain. NOAA Technical Memorandum NMFS-SWFSC-423. 173 p.
914	Starr, R., M. Yoklavich, et al. 2008. Monitoring MPAs in deep water off central California: 2007 IMPACT submersible baseline survey. California Sea Grant College Program, Publication no. T-067. 21 p.
771	Szerlong, R. G., and D. E. Rundio. 2008. A statistical modeling method for estimating mortality and abundance of spawning salmon from a time series of counts. Canadian Journal of Fisheries and Aquatic Sciences 65(1):17-26.
891	Thomson, C. J., and C. Pinkerton. 2008. Habitat restoration cost references for salmon recovery planning. NOAA Technical Memorandum NMFS-SWFSC-425. 75 p.
905	Waples, R. S., P. B. Adams, J. Bohnsack, and B. L. Taylor. 2008. Legal viability, societal values, and SPOIR: response to D'Elia et al. Conservation Biology 22(4):1075-1077.
1059	Watters, George M., Robert J. Olson, John C. Field, and Timothy E. Essington. 2008. Range expansion of the Humboldt squid was not caused by tuna fishing. Proceedings of the National Academy of Sciences of the United States of America 105(3):E5.
799	Wells, B. K., C. B. Grimes, J. G. Sneva, S. McPherson, and J. B. Waldvogel. 2008. Relationships between oceanic conditions and growth of Chinook salmon (Oncorhynchus tshawytscha) from California, Washington, and Alaska, USA. Fisheries Oceanography 17(2):101-125.
907	Wells, B. K., J. C. Field, J. A. Thayer, C. B. Grimes, S. J. Bograd, W. J. Sydeman, F. B Schwing, and R. Hewitt. 2008. Untangling the relationships among climate, prey and top predators in an ocean ecosystem. Marine Ecology Progress Series 364:15-29.
1204	Wells, Brian, Michael Mohr, Masami Fujiwara, and Churchill Grimes. 2008. Incorporation of ocean environmental variation in the Klamath River fall Chinook (KRFC) salmon stock assessment. Report to NOAA Fisheries and the Environment (FATE) program, Project 07-08. NOAA National Marine Fisheries Service, Silver Spring, Maryland. 3 p.
927	Williams, T. H., and G. H. Reeves. 2008. Geographic variation in genetic and meristic characters of coastal cutthroat trout. In: P. J. Connolly, T. H. Williams, and R. E. Gresswell (eds.), The 2005 Coastal Cutthroat Trout Symposium: status, management, biology, and conservation, p. 110-111. American Fisheries Society, Oregon Chapter.
815	Williams, Thomas H., Brian C. Spence, Walt Duffy, Dave Hillemeier, George Kautsky, Tom E. Lisle, Mike McCain, Thomas E. Nickelson, Ethan Mora, and Tom Pearson. 2008. Framework for assessing viability of threatened coho salmon in the Southern Oregon/Northern California Coast Evolutionarily Significant Unit. NOAA Technical Memorandum NMFS-SWFSC-432. 96 p.
867	Yoklavich, M. M., and V. O'Connell. 2008. Twenty years of research on demersal communities using the Delta submersible in the northeast Pacific. In: J. R. Reynolds and H. G. Greene (eds.), Marine habitat mapping technology for Alaska, p. 143-155. Alaska Sea Grant College Program, University of Alaska, Fairbanks.
814	Adams, P. B., C. Grimes, J. E. Hightower, S. T. Lindley, M. L. Moser, and M. J. Parsley. 2007. Population status of North American green sturgeon, Acipenser medirostris. Environmental Biology of Fishes 79(3-4):339-356.
498	Adams, P. B., L. W. Botsford, K. W. Gobalet, R. A. Leidy, D. R. McEwan, P. B. Moyle, J. J. Smith, J. G. Williams, and R. M. Yoshiyama. 2007. Coho salmon are native south of San Francisco Bay: a reexamination of North American coho salmon's southern range limit. Fisheries 32(9):441-451.
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628	Ryer, C. H., M. L. Ottmar, and E. A. Sturm. 2004. Behavioral impairment after escape from trawl codends may not be limited to fragile fish species. Fisheries Research 66(2-3):261-269.
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242	Starr, R. M., M. H. Carr, J. Caselle, J. A. Estes, C. Syms, D. A. VenTresca, and M. M. Yoklavich. 2004. A review of the ecological effectiveness of subtidal marine reserves in Central California. Part II: Summary of existing marine reserves in Central California and their potential benefits. Marine Sanctuaries Conservation Series MSD-04-3. NOAA Marine Sanctuaries Division, Silver Spring, MD. 13 p.
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519	Thomson, C. 2004. Salmon Habitat Restoration Cost Workshop: introduction. In: S. T. Allen, C. Thomson, and R. Carlson, Proceedings of the Salmon Habitat Restoration Cost Workshop, p. 1-2. Pacific States Marine Fisheries Commission, Portland, Oregon.
520	Thomson, C. 2004. Workshop conclusions and recommendations. In: S. T. Allen, C. Thomson, and R. Carlson, Proceedings of the Salmon Habitat Restoration Cost Workshop, p. 236-251. Pacific States Marine Fisheries Commission, Portland, Oregon.
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682	Bjorkstedt, E. P. 2003. California coastal chinook salmon. In: Updated status of federally listed ESUs of west coast salmon and steelhead, p. A116-A123. National Marine Fisheries Service, West Coast Salmon Biological Review Team (Seattle, WA and Santa Cruz, CA).
684	Boughton, D. 2003. Central California Coast steelhead. In: Updated status of federally listed ESUs of west coast salmon and steelhead, p. B98-B106. National Marine Fisheries Service, West Coast Salmon Biological Review Team (Seattle, WA and Santa Cruz, CA).
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686	Boughton, D. 2003. Southern California steelhead. In: Updated status of federally listed ESUs of west coast salmon and steelhead, p. B115-B123. National Marine Fisheries Service, West Coast Salmon Biological Review Team (Seattle, WA and Santa Cruz, CA).
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698	Edwards, R. E., K. J. Sulak, M. T. Randall, and C. B. Grimes. 2003. Movements of Gulf sturgeon (Acipenser oxyrinchus desotoi) in nearshore habitat as determined by acoustic telemetry. Gulf of Mexico Science 21(1):59-70.
735	Garza, J. C., and E. Gilbert-Horvath. 2003. Report on the genetics of coho salmon (Oncorhynchus kisutch) held at Warm Springs (Don Clausen) Hatchery for recovery efforts in the Russian River. NOAA National Marine Fisheries Service, Southwest Fisheries Science Center, Santa Cruz, CA. 17 p.
654	He, X., A. Punt, A. D. MacCall, and S. Ralston. 2003. Rebuilding analysis for widow rockfish in 2003. Pacific Fishery Management Council, Portland, Oregon. 21 p.
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688	Lindley, S. T. 2003. Central Valley spring-run chinook salmon. In: Updated status of federally listed ESUs of west coast salmon and steelhead, p. A131-A142. National Marine Fisheries Service, West Coast Salmon Biological Review Team (Seattle, WA and Santa Cruz, CA).
209	Lindley, S. T. 2003. Estimation of population growth and extinction parameters from noisy data. Ecological Applications 13(3):806-813.
687	Lindley, S. T. 2003. Sacramento River winter-run chinook salmon. In: Updated status of federally listed ESUs of west coast salmon and steelhead, p. A124-A130. National Marine Fisheries Service, West Coast Salmon Biological Review Team (Seattle, WA and Santa Cruz, CA).
117	Lindley, S. T., and M. S. Mohr. 2003. Modeling the effect of striped bass (Morone saxatilis) on the population viability of Sacramento River winter-run chinook salmon (Oncorhynchus tshawytscha). Fishery Bulletin 101(2):321-331.
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657	MacCall, A. D. 2003. Bocaccio rebuilding analysis for 2003. Pacific Fishery Management Council, Portland, Oregon. 14 p.
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523	Pontius, R. G., Jr., A. Agrawal, and D. Huffaker. 2003. Estimating the uncertainty of land-cover extrapolations while constructing a raster map from tabular data. Journal of Geographical Systems 5(3):253-273.
655	Ralston, S., and E. J. Dick. 2003. The status of black rockfish (Sebastes melanops) off Oregon and northern California in 2003. Pacific Fishery Management Council, Portland, Oregon. 70 p.
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826	Ralston, S., R. Conser, M. Dalton, M. Dorn, T. Jagielo, H.-L. Lai, B. Culver, and T. Ghio. 2003. STAR Lite Panel (NWFSC Montlake Lab, Seattle, Washington, May 28-29, 2003). Pacific Fishery Management Council, Portland, Oregon. 9 p.
699	Southwest Fisheries Science Center, Santa Cruz Laboratory. 2003. Cruise report DS-03-04, David Starr Jordan, May 12 - June 13, 2003: rockfish recruitment assessment. National Marine Fisheries Service, Santa Cruz, California. 14 p.
691	Spence, B. C., and E. P. Bjorkstedt. 2003. Central California coast coho salmon. In: Updated status of federally listed ESUs of west coast salmon and steelhead, p. C54-C70. National Marine Fisheries Service, West Coast Salmon Biological Review Team (Seattle, WA and Santa Cruz, CA).
690	Spence, B. C., T. C. Wainwright, and E. P. Bjorkstedt. 2003. Southern Oregon / Northern California coasts coho salmon. In: Updated status of federally listed ESUs of west coast salmon and steelhead, p. C30-C53. National Marine Fisheries Service, West Coast Salmon Biological Review Team (Seattle, WA and Santa Cruz, CA).
674	Tuck, G. N., W. K. de la Mare, W. S. Hearn, R. Williams, A. D. M. Smith, X. He, and A. Constable. 2003. An exact time of release and recapture stock assessment model with an application to Macquarie Island Patagonian toothfish (Dissostichus eleginoides). Fisheries Research 63(2):179-191.
748	West Coast Salmon Biological Review Team. 2003. Updated status of federally listed ESUs of west coast salmon and steelhead. National Marine Fisheries Service, Seattle, WA, and Santa Cruz, CA. 619 p. (Draft report. Final version released as NOAA Technical Memorandum NMFS-NWFSC-66, 2005.)
123	Wlasiuk, G., J. C. Garza, and E. Lessa. 2003. Genetic and geographic differentiation in the Rio Negro tuco-tuco (Ctenomys rionegrensis): distinguishing historical and contemporary gene flow. Evolution 57:913-926.
624	Yoklavich, M. M., C. B. Grimes, and W. W. Wakefield. 2003. Using laser line scan imaging technology to assess deepwater seafloor habitats in the Monterey Bay National Marine Sanctuary. Marine Technology Society Journal 37(1):18-26.
630	Adams, P. B., C. B. Grimes, S. T. Lindley, and M. L. Moser. 2002. Status review for North American green sturgeon, Acipenser medirostris. National Marine Fisheries Service, Santa Cruz, California. 50 p.
29	Allman, R. J., and C. B. Grimes. 2002. Temporal and spatial dynamics of spawning, settlement, and growth of gray snapper (Lutjanus griseus) from the West Florida shelf as determined from otolith microstructures. Fishery Bulletin 100(3):391-403.
442	Baltz, K. 2002. Cruise report DS-02-05, David Starr Jordan, May 9 - June 11, 2002: rockfish recruitment assessment. National Marine Fisheries Service, Santa Cruz, California. 12 p.
220	Bjorkstedt, E. P., L. K. Rosenfeld, B. A. Grantham, Y. Shkedy, and J. Roughgarden. 2002. Distributions of larval rockfishes Sebastes spp. across nearshore fronts in a coastal upwelling region. Marine Ecology Progress Series 242:215-228.
8	DeVries, D. A., C. B. Grimes, and M. H. Prager. 2002. Using otolith shape analysis to distinguish eastern Gulf of Mexico and Atlantic Ocean stocks of king mackerel. Fisheries Research 57:51-62.
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185	Grover, A. M., M. S. Mohr, and M. L. Palmer-Zwahlen. 2002. Hook-and-release mortality of chinook salmon from drift mooching with circle hooks: management implications for California's ocean sport fishery. In: J. A. Lucy and A. L. Studholme (eds.), Catch and release in marine recreational fisheries, p. 39-56. American Fisheries Society Symposium 30.
497	Hobson, T. 2002. Sebastes mystinus: blue rockfish. In: M. S. Love, M. Yoklavich, and L. Thorsteinson, The rockfishes of the Northeast Pacific, p. 215-218. University of California Press.
489	Klamath River Technical Advisory Team. 2002. Ocean abundance projections and prospective harvest levels for Klamath River fall chinook, 2002 season. Klamath Fishery Management Council, Yreka, California. 16 p.
38	Levin, Phillip S., and Churchill B. Grimes. 2002. Reef fish ecology and grouper conservation and management. In: Peter F. Sale (ed.), Coral reef fishes: dynamics and diversity in a complex ecosystem, p. 377-389. Academic Press.
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616	MacCall, A. D. 2002. A non-technical explanation of the groundfish disaster. In: M. S. Love, M. Yoklavich, and L. Thorsteinson, The rockfishes of the Northeast Pacific, p. 90-91. University of California Press.
39	MacCall, A. D. 2002. Fishery-management and stock-rebuilding prospects under conditions of low-frequency environmental variability and species interactions. Bulletin of Marine Science 70(2):613-628.
189	MacCall, A. D. 2002. Sardine regimes and mesoscale structure (an integrative hypothesis). In: A. Bakun and K. Broad (eds.), Climate and fisheries: the IRI-IPRC Pacific Climate-Fisheries Workshop (Honolulu, 14-17 November 2001), p. 39-42. International Research Institute for Climate Prediction (IRI), Palisades, New York. IRI Publication IRI-CW/02/1.
253	MacCall, A. D. 2002. Status of bocaccio off California in 2002. Pacific Fishery Management Council, Portland, Oregon.
41	MacCall, A. D. 2002. Use of known-biomass production models to determine productivity of West Coast groundfish stocks. North American Journal of Fisheries Management 22(1):272-279.
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254	MacCall, A. D., and X. He. 2002. Bocaccio rebuilding analysis for 2002 (final revised version). Pacific Fishery Management Council, Portland, Oregon.
366	MacCall, A., and X. He. 2002. Status review of the southern stock of Bocaccio (Sebastes paucispinis). National Marine Fisheries Service, Santa Cruz Laboratory, Santa Cruz, California. (Endangered Species Act report to the NMFS Southwest Region.)
237	MacCall, Alec. 2002. Sardine regimes and mesoscale structure (an integrative hypothesis): an hypothesis explaining biological regimes in sardine-producing Pacific boudary current systems (South America, North America and Japan): implications of alternating modes of slow, meandering flow and fast linear flow in the offshore region. In: Andres Bakun and Kenneth Broad (eds.), Climate and fisheries: interacting paradigms, scales, and policy approaches. The IRI-IPRC Pacific Climate-Fisheries Workshop (Honolulu, 14-17 November 2001), p. 39-42. International Research Institute for Climate Prediction (IRI), Columbia University, Palisades, New York. IRI Publication IRI-CW/02/1.
114	MacFarlane, R. B., and E. C. Norton. 2002. Physiological ecology of juvenile chinook salmon (Onchorhynchus tshawytscha) at the southern end of their distribution, the San Francisco Estuary and Gulf of the Farallones, California. Fishery Bulletin 100:244-257.
139	MacFarlane, R. B., S. Ralston, C. Royer, and E. C. Norton. 2002. Influences of the 1997-1998 El Nino and 1999 La Nina on juvenile chinook salmon in the Gulf of the Farallones. PICES Scientific Report 20:25-29.
599	NMFS Santa Cruz Laboratory. 2002. Santa Cruz Laboratory program review 2002. National Marine Fisheries Service, Santa Cruz, California. 112 p.
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441	Baltz, K. A. 1997. Ten years of hydrographic variability off Central California during the upwelling season. Master's thesis, Naval Postgraduate School, Monterey, California. Naval Postgraduate School Technical Report NPS OC-97-008. 319 p.
176	Chess, J. R., and E. S. Hobson. 1997. Benthic invertebrates of four southern California marine habitats prior to onset of ocean warming in 1976, with lists of fish predators. NOAA Technical Memorandum NMFS-SWFSC-243. 110 p.
533	Chess, J. R., E. S. Hobson, and D. F. Howard. 1997. Interactions between Acanthaster planci (Echinodermata, Asteroidea) and scleractinian corals at Kona, Hawai'i. Pacific Science 51(2):121-133.
528	Foley, D.G., T.D. Dickey, M.J. McPhaden, R.R. Bidigare, M.R. Lewis, R.T. Barber, S.T. Lindley, C. Garside, D.V. Manov, and J.D. McNeil. 1997. Longwaves and primary productivity variations in the equatorial Pacific at 0°, 140°W. Deep-Sea Research II 44(9-10):1801-1826.
585	Jagielo, Thomas, Peter Adams, Martin Peoples, Sandra Rosenfield, Kelly Silberberg, and Tom Laidig. 1997. Assessment of lingcod in 1997. In: Status of the Pacific coast grounfish fishery through 1997 and recommended acceptable biological catches for 1998, appendix (85 p.). Pacific Fishery Management Council, Portland, Oregon.
141	Laidig, T. E., P. B. Adams, and W. M. Samiere. 1997. Feeding habits of sablefish, Anoplopoma fimbria, off the coast of Oregon and California. In: M. E. Wilkins and M. W. Saunders (eds.), Biology and management of sablefish, Anoplopoma fimbria: papers from the International Symposium on the Biology and Management of Sablefish (Seattle, Washington, 13-15 April 1993), p. 65-79. NOAA Technical Report NMFS 130.
167	Laidig, T. E., P. B. Adams, K. R. Silberberg, and H. E. Fish. 1997. Conversions between total, fork, and standard lengths for lingcod, Ophiodon elongatus. California Fish and Game 83(3):128-129.
239	Lenarz, W. H., and F. R. Shaw. 1997. Estimates of tag loss from double-tagged sablefish, Anoplopoma fimbria. Fishery Bulletin 95:293-299.
157	Lindley, S. T. (ed.). 1997. Estimating escapement of the Sacramento River winter-run chinook: a review of methods. NMFS SWFSC Administrative Report T-97-02. 19 p.
647	Mohr, Michael. 1997. Documentation for 1998 Klamath Ocean Harvest Model. Klamath River Technical Advisory Team, Klamath Fishery Management Council, Yreka, California. 38 p.
154	Pearson, D. E., and B. Erwin. 1997. Documentation of California's commercial market sampling data entry and expansion programs. NOAA Technical Memorandum NMFS-SWFSC-240. 62 p.
166	Prager, M. H., and M. S. Mohr. 1997. An improved implementation of the harvest rate model for Klamath River chinook salmon. NMFS SWFSC Administrative Report T-97-01 (corrected edition). 18 p.
129	Ralston, Stephen, and Donald Pearson. 1997. Status of the widow rockfish stock in 1997. In: Status of the Pacific coast groundfish fishery through 1997 and recommended acceptable biological catches for 1998: stock assessment and fishery evaluation, appendix (54 p.). Pacific Fishery Management Council, Portland, Oregon.
582	Roberts, D., S. Ralston, K. M. Sakuma, S. R. Wing, and D. P. Woodbury. 1997. Year-end report on monitoring studies conducted during 1996 at the San Francisco deep ocean disposal site to assess possible impacts of the disposal of dredged materials on important organisms of the upper water column. NOAA National Marine Fisheries Service, Tiburon Laboratory, Groundfish Analysis Branch. Prepared for the U.S. Army Corps of Engineers, San Francisco, California. 180 p.
142	Sakuma, K. M., and S. Ralston. 1997. Vertical and horizontal distribution of juvenile Pacific whiting (Merluccius productus) in relation to hydrograhy off California. CalCOFI Reports 38:137-146.
224	Sakuma, K. M., F. B. Schwing, K. Baltz, D. Roberts, S. Ralston. 1997. The physical oceanography off the central California coast during May-June, 1996: a summary of CTD data from pelagic juvenile rockfish surveys. NOAA Technical Memorandum NMFS-SWFSC-246. 155 p.
223	Schwing, F. B., T. L. Hayward, K. A. Baltz, T. Murphree, K. M. Sakuma, A. S. Mascarenas Jr., A. W. Mantyla, S. I. Castillo, S. L. Cummings, D. G. Ainley, and F. Chavez. 1997. The state of the California Current, 1996-1997: mixed signals from the tropics. CalCOFI Reports 38:22-47.
212	Thomson, Cynthia. 1997. Analysis of agency costs attributable to the recovery plan for Sacramento River winter-run chinook salmon. NOAA Technical Memorandum NMFS-SWFSC-249. 80 p.
822	West Coast Coho Salmon Biological Review Team. 1997. Status review update for coho salmon from the Oregon and Northern California coasts. National Marine Fisheries Service, Seattle, Washington. 100 p.
1019	Woodbury, D. 1997. Cruise report DS-97-03, David Starr Jordan, February 24 - March 6, 1997: SF-DODS biological monitoring. National Marine Fisheries Service, Southwest Fisheries Science Center, Groundfish Analysis Branch, Tiburon, California. (5 p.)
156	Adams, P. B., T. E. Laidig, K. R. Silberberg, M. J. Bowers, B. M. Jarvis, K. M. Sakuma, K. Baltz, and D. P. Woodbury. 1996. Historical and current presence-absence data of coho salmon (Oncorhynchus kisutch) in the Central California Evolutionary Significant Unit. NMFS SWFSC Administrative Report T-96-01. 24 p.
210	Adams, Peter B., and Daniel F. Howard. 1996. Natural mortality of blue rockfish, Sebastes mystinus, during their first year in nearshore benthic habitats. Fishery Bulletin 94:156-162.
540	Castleberry, D. T., J. J. Cech, Jr., D. C. Erman, D. Hankin, M. Healey, G. M. Kondolf, M. Mangel, M. Mohr, P. B. Moyle, J. Nielsen, T. P. Speed, and J. G. Williams. 1996. Uncertainty and instream flow standards. Fisheries 21(8):20-21.
541	Eldridge, M. B., and B. M. Jarvis. 1996. Development and energy utilization in early life stages of viviparous yellowtail rockfish. In: D. MacKinlay and M. Eldridge (eds.), The fish egg: its biology and culture, p. 131-140. International Congress on the Biology of Fishes: American Fisheries Society, Physiology Section, San Francisco State University, July 14-18, 1996.
600	Eldridge, Mickey, and Don MacKinlay. 1996. Preface. In: Don MacKinlay and Maxwell Eldridge (eds.), The fish egg: its biology and culture. Symposium proceedings, International Congress on the Biology of Fishes (San Francisco State University, July 14-18, 1996), p. 3. American Fisheries Society, Physiology Section.
243	Hightower, J. E. 1996. Comparison of reliability of catch-at-age analyses using auxiliary survey estimates of relative or absolute recruitment. Canadian Journal of Fisheries and Aquatic Sciences 53:70-79.
542	Hobson, E. S., and J. R. Chess. 1996. Examination of a great abundance of filefish, Pervagor spilosoma, in Hawaii. Environmental Biology of Fishes 47:269-278.
170	Hobson, Edmund S., James R. Chess, and Daniel F. Howard. 1996. Zooplankters consumed by blue rockfish during brief access to a current off California's Sonoma coast. California Fish and Game 82(2):87-92.
543	Jacobson, L. D., S. Ralston, and A. D. MacCall. 1996. Historical larval abundance indices for bocaccio rockfish (Sebastes paucispinus) from CalCOFI data. NMFS SWFSC Administrative Report LJ-96-06. 30 p.
140	Laidig, T. E., K. M. Sakuma, and M. M. Nishimoto. 1996. Description of pelagic larval and juvenile stripetail rockfish, Sebastes saxicola (family Scorpaenidae), with an examination of larval growth. Fishery Bulletin 94:289-299.
174	MacCall, A. D. 1996. Patterns of low-frequency variability in fish populations of the California Current. CalCOFI Reports 37:100-110.
250	MacCall, Alec D. 1996. Too little, too late: treating the problem of inaction. Ecological Applications 6(2):368-369.
544	MacFarlane, R. B., and E. C. Norton. 1996. Lipid and protein changes during embryo development in the viviparous genus Sebastes: application to the assessment of reproductive success. In: D. MacKinlay and M. Eldridge (eds.), The fish egg: its biology and culture, p. 95-102. International Congress on the Biology of Fishes: American Fisheries Society, Physiology Section, San Francisco State University, July 14-18, 1996.
545	MacKinlay, Don, and Maxwell Eldridge (eds.). 1996. The fish egg: its biology and culture. Symposium proceedings, International Congress on the Biology of Fishes (San Francisco State University, July 14-18, 1996). American Fisheries Society, Physiology Section. 192 p.
149	Pearson, Donald E. 1996. Timing of hyaline-zone formation as related to sex, location, and year of capture in otoliths of the widow rockfish, Sebastes entomelas. Fishery Bulletin 94(1):190-197.
547	Prager, M. H., C. P. Goodyear, and G. P. Scott. 1996. Application of a surplus-production model to a swordfish-like simulated stock with time-changing gear selectivity. Transactions of the American Fisheries Society 125:729-740.
251	Ralston, S., E. B. Brothers, D. A. Roberts, and K. M. Sakuma. 1996. Accuracy of age estimates for larval Sebastes jordani. Fishery Bulletin 94:89-97.
548	Ralston, S., J. N. Ianelli, R. A. Miller, D. E. Pearson, D. Thomas, and M. E. Wilkins. 1996. Status of bocaccio in the Conception/Monterey/Eureka INPFC areas in 1996 and recommendations for management in 1997. In: Status of the Pacific coast groundfish fishery through 1996 and recommended acceptable biologic catches for 1997, appendix B. Pacific Fishery Management Council, Portland, Oregon.
226	Sakuma, K. M., F. B. Schwing, K. Baltz, D. Roberts, H. A. Parker, and S. Ralston. 1996. The physical oceanography off the central California coast during May-June, 1995: a summary of CTD data from pelagic juvenile rockfish surveys. NOAA Technical Memorandum NMFS-SWFSC-232. 144 p.
155	Adams, P. B. (ed.). 1995. Progress in rockfish recruitment studies. NMFS SWFSC Administrative Report T-95-01. 51 p.
234	Adams, P. B., J. L. Butler, C. H. Baxter, T. E. Laidig, K. A. Dahlin, and W. W. Wakefield. 1995. Population estimates of Pacific coast groundfishes from video transects and swept-area trawls. Fishery Bulletin 93:446-455.
549	Bence, James R. 1995. Analysis of short time series: correcting for autocorrelation. Ecology 76(2):628-639.
550	Eldridge, M. B., and B. M. Jarvis. 1995. Temporal and spatial variation in fecundity of yellowtail rockfish. Transactions of the American Fisheries Society 124(1):16-25.
1106	FAO. 1995. Precautionary approach to fisheries. Part 1: Guidelines on the precautionary approach to capture fisheries and species introductions. Elaborated by the Technical Consultation on the Precautionary Approach to Capture Fisheries (Including Species Introductions), Lysekil, Sweden, 6-13 June 1995. FAO Fisheries Technical Paper 350/1. 52 p.
178	Hobson, E., J. Chess, and D. Howard. 1995. Anomalous damage inflicted by Hurricane Iniki on a Hawaiian coral reef. Bulletin of Marine Science 57(2):495-500.
551	Hopkins, T. E., M. B. Eldridge, and J. J. Cech, Jr. 1995. Metabolic costs of viviparity in yellowtail rockfish, Sebastes flavidus. Environmental Biology of Fishes 43:77-84.
552	Jacobson, L. D., and A. D. MacCall. 1995. Stock-recruitment models for Pacific sardine. Canadian Journal of Fisheries and Aquatic Sciences 52:566-577.
179	Laidig, T. E., and S. Ralston. 1995. The potential use of otolith characters in identifying larval rockfish (Sebastes spp.). Fishery Bulletin 93(1):166-171.
169	Laidig, T. E., P. B. Adams, C. H. Baxter, and J. L. Butler. 1995. Feeding on euphausiids by Octopus rubescens. California Fish and Game 81(2):77-79.
240	Lenarz, W. H., D. A. Ventresca, W. M. Graham, F. B. Schwing, and F. Chavez. 1995. Explorations of El Nino events and associated biological population dynamics off central California. CalCOFI Reports 36:106-119.
236	MacFarlane, R. B., and M. J. Bowers. 1995. Matrotrophic viviparity in the yellowtail rockfish Sebastes flavidus. Journal of Experimental Biology 198:1197-1206.
215	Norton, E. C., and R. B. MacFarlane. 1995. Nutritional dynamics of reproduction in viviparous yellowtail rockfish, Sebastes flavidus. Fishery Bulletin 93:299-307.
158	Pearson, Donald E., and Glenn Almany. 1995. The effectiveness of California's commercial rockfish port sampling program. NOAA Technical Memorandum NMFS-SWFSC-218. 50 p.
554	Ralston, S., and D. F. Howard. 1995. On the development of year-class strength and cohort variability in two northern California rockfishes. Fishery Bulletin 93(4):710-720.
555	Ralston, Stephen. 1995. The influence of oceanographic variables on time series of otolith growth in pelagic young-of-the-year rockfish, Sebastes spp. In: David H. Secor, John M. Dean, and Steven E. Campana (eds.), Recent developments in fish otolith research, p. 97-118. University of South Carolina Press, Columbia, SC.
557	Sakuma, K. M., and R. J. Larson. 1995. Distribution of pelagic metamorphic-stage sanddabs Citharichthys sordidus and C. stigmaeus within areas of upwelling off central California. Fishery Bulletin 93:516-529.
218	Sakuma, K. M., and S. Ralston. 1995. Distributional patterns of late larval groundfish off central California in relation to hydrographic features during 1992 and 1993. CalCOFI Reports 36:179-192.
558	Sakuma, K. M., and T. E. Laidig. 1995. Description of larval and pelagic juvenile chilipepper, Sebastes goodei (family Scorpaenidae), with an examination of larval growth. Fishery Bulletin 93:721-731.
159	Sakuma, K. M., F. B. Schwing, H. A. Parker, and S. Ralston. 1995. The physical oceanography off the central California coast during February and May-June, 1991: a summary of CTD data from larval and pelagic juvenile rockfish surveys. NOAA Technical Memorandum NMFS-SWFSC-220. 156 p.
160	Sakuma, K. M., F. B. Schwing, H. A. Parker, K. Baltz, and S. Ralston. 1995. The physical oceanography off the central California coast during March and May-June, 1994: a summary of CTD data from larval and pelagic juvenile rockfish surveys. NOAA Technical Memorandum NMFS-SWFSC-221. 202 p.
724	Schwing, F., and S. Ralston. 1995. Symposium of the CalCOFI Conference (Fallen Leaf Lake, California, October 25, 1994): the 1991-1992 El Nino and its impact on fisheries [Introduction]. CalCOFI Reports 36:43.
559	Woodbury, D., A. B. Hollowed, and J. A. Pearce. 1995. Interannual variation in growth rates and back-calculated spawn dates of juvenile Pacific hake (Merluccius productus). In: D. H. Secor, J. M. Dean, and S. E. Campana (eds.), Recent developments in fish otolith research, p. 481-496. University of South Carolina Press, Columbia, SC.
560	Adams, P. B. 1994. An examination of the 1992 and 1993 commercial and recreational lingcod sampling in Oregon and California. In: Status of the Pacific coast groundfish fishing throughout 1994 and recommended biological catches for 1995, appendix J. Pacific Fishery Management Council, Portland, Oregon.
245	DeMartini, E. E., K. C. Landgraf, and S. Ralston. 1994. A recharacterization of the age-length and growth relationships of Hawaiian snapper, Pristipomoides filamentosus. NOAA Technical Memorandum NMFS-SWFSC-199. 14 p.
488	Eldridge, M. B. (ed.). 1994. Progress in rockfish recruitment studies. NMFS SWFSC Administrative Report T-94-01. 55 p.
162	Eldridge, Maxwell B. 1994. Hook-and-line fishing study at Cordell Bank, California, 1986-1991. NOAA Technical Memorandum NMFS-SWFSC-197. 24 p.
561	Hobson, E. S. 1994. Ecological relations in the evolution of acanthopterygian fishes of warm-temperate communities of the northeastern Pacific. Environmental Biology of Fishes 40:49-90.
553	Kope, R. G., and L. W. Botsford. 1994. The winter run chinook salmon: ready to reclaim the Sacramento River? Tideline (U.S. Fish and Wildlife Service) 14(4):2-5.
562	Larson, R. J., W. H. Lenarz, and S. Ralston. 1994. The distribution of pelagic juvenile rockfish of the genus Sebastes in the upwelling region off central California. CalCOFI Reports 35:175-221.
563	Lenarz, W. H. 1994. Estimation of weight-length relationships from group measurements. Fishery Bulletin 92(1):198-202.
564	MacCall, A. D., and K. Tatsukawa. 1994. Theoretical effects of habitat selection on distribution and productivity of whales. International Whaling Commission, Report 44:407-411.
584	Mackett, D., L. Jacobson, A. MacCall, S. Pooley, W. Silverthorne, D. Squires, and C. Thomson. 1994. A plan for establishing a system to deliver sociological and cultural information to support fishery management, recovery of protected species, and coastal ecosystem health. NMFS SWFSC Administrative Report LJ-94-10. 16 p.
565	Pearson, Donald E. 1994. An initial examination of the status of the bank rockfish fishery off the coast of California. In: Status of the Pacific coast groundfish fishery through 1994 and recommended acceptable biological catches for 1995, appendix E (22 p.). Pacific Fishery Management Council, Portland, Oregon.
566	Rogers, J. B. 1994. Preliminary status of the splitnose rockfish stock in 1994. In: Status of the Pacific coast groundfish fishery through 1994 and recommended acceptable biological catches for 1995, appendix H. Pacific Fishery Management Council, Portland, Oregon.
1263	Rosenberg, A., P. Mace, G. Thompson, G. Darcy, W. Clark, J. Collie, W. Gabriel, A. MacCall, R. Methot, J. Powers, V. Restrepo, T. Wainwright, L. Botsford, J. Hoenig, and K. Stokes. 1994. Scientific review of definitions of overfishing in U.S. fishery management plans. NOAA Technical Memorandum NMFS-F/SPO-17. 205 p.
252	Sakuma, K. M., H. A. Parker, S. Ralston, F. B. Schwing, D. M. Husby, and E. M. Armstrong. 1994. The physical oceanography off the central California coast during February-March and May-June 1992: a summary of CTD data from pelagic young-of-the-year rockfish surveys. NOAA Technical Memorandum NMFS-SWFSC-208. 169 p.
175	Sakuma, K. M., H. A. Parker, S. Ralston, F. B. Schwing, D. M. Husby, and E. M. Armstrong. 1994. The physical oceanography off the central California coast during March and May-June 1993: a summary of CTD data from pelagic young-of-the-year rockfish surveys. NOAA Technical Memorandum NMFS-SWFSC-209. 168 p.
567	Adams, P. B., S. Ralston, and T. E. Laidig. 1993. Occurrence of an exceptional catch of pelagic juvenile lingcod (Ophiodon elongatus) off Point Reyes, California. Fisheries Oceanography 2(2):97-100.
568	Ainley, D. G., W. J. Sydeman, R. H. Parrish, and W. H. Lenarz. 1993. Oceanic factors influencing distribution of young rockfish (Sebastes) in central California: a predator's perspective. CalCOFI Reports 34:133-139.
244	Bence, J. R., A. Gordoa, and J. E. Hightower. 1993. Influence of age-selective surveys on the reliability of stock synthesis assessments. Canadian Journal of Fisheries and Aquatic Sciences 50(4):827-840.
569	Chess, J. R. 1993. Effects of the stipe-boring amphipod Peramphithoe stypotrupetes (Corophioidea: Ampithoidae) and grazing gastropods on the kelp Laminaria setchellii. Journal of Crustacean Biology 13(4):638-646.
571	Lenarz, W. H. 1993. Overview of the groundfish fisheries of the west coast of the United States of America. In: 12th Semana Das Pescas Dos Acores, 16 a 20 de Marco, Horta-Faial, Relatorio 1992, p. 215-219.
676	Lenarz, William H. 1993. Advice under uncertainty to managers for two fisheries of the northeastern Pacific. ICES Council Meeting Papers, ICES C.M. 1993/D:10. 9 p.
573	MacCall, A. D. 1993. Long-term variability of pelagic fish populations and their environment. Copeia 1993(2):573-575.
572	MacCall, A. D. 1993. Overview paper: Advice for stock rebuilding. In: Andrew A. Rosenberg (ed.), Defining overfishing -- Defining stock rebuilding: Report of the second annual National Stock Assessment Workshop (NOAA Southwest Fisheries Science Center, La Jolla, California, March 31 - April 2, 1992), p. 47-59. NOAA Technical Memorandum NMFS-F/SPO-8.
574	MacFarlane, R. B., E. C. Norton, and M. J. Bowers. 1993. Lipid dynamics in relation to the annual reproductive cycle in yellowtail rockfish (Sebastes flavidus). Canadian Journal of Fisheries and Aquatic Sciences 50(2):391-401.
575	Okihiro, M. S., J. A. Whipple, J. M. Groff, and D. E. Hinton. 1993. Chromatophoromas and chromatophore hyperplasia in Pacific rockfish (Sebastes spp.). Cancer Research 53:1761-1769.
576	Pearson, D. E., D. A. Douglas, and B. Barss. 1993. Biological observations from the Cobb Seamount rockfish fishery. Fishery Bulletin 91(3):573-576.
143	Prager, M. H., and A. D. MacCall. 1993. Detection of contaminant and climate effects on spawning success of three pelagic fish stocks off southern California: northern anchovy Engraulis mordax, Pacific sardine Sardinops sagax, and chub mackerel Scomber japonicus. Fishery Bulletin 91:310-327.
487	Ralston, S. (ed.). 1993. Progress in rockfish recruitment studies. NMFS SWFSC Administrative Report T-93-01.
577	Ralston, Stephen. 1993. Otolith microstructure examination and analysis, D.K. Stevenson and S.E. Campana (eds.) [book review]. Copeia 1993(4):1197-1199.
578	Rogers, J. B., and J. R. Bence. 1993. Status of the chilipepper rockfish stock in 1993. In: Status of the Pacific coast groundfish fishery through 1993 and recommended acceptable biological catches for 1994, appendix D. Pacific Fishery Management Council, Portland, Oregon.
579	Rogers, J. B., and W. H. Lenarz. 1993. Status of the widow rockfish stock in 1993. In: Status of the Pacific coast groundfish fishery through 1993 and recommended acceptable biological catches for 1994, appendix B. Pacific Fishery Management Council, Portland, Oregon.
163	Silberberg, K. R., and P. B. Adams. 1993. A comparison of the recreational and commercial fisheries for lingcod (Ophiodon elongatus) off the Pacific coast of the United States, and a description of the recreational lingcod fishery. NOAA Technical Memorandum NMFS-SWFSC-193. 29 p.
570	Somerton, David (moderator), and Robert Kope (rapporteur). 1993. Session I summary: Criteria for defining recruitment overfishing for fish and marine mammals. In: Andrew A. Rosenberg (ed.), Defining overfishing -- Defining stock rebuilding: Report of the second annual National Stock Assessment Workshop (NOAA Southwest Fisheries Science Center, La Jolla, California, March 31 - April 2, 1992), p. 2-5. NOAA Technical Memorandum NMFS-F/SPO-8.
150	Adams, P. B. (ed.). 1992. Progress in rockfish recruitment studies. NMFS SWFSC Administrative Report T-92-01. 63 p.
1123	Adams, P.B. 1992. Brown rockfish. In: W.S. Leet, C.M. Dewees, and C.W. Haugen (eds.), California's living marine resources and their utilization, p. 127-128. California Sea Grant Extension Publication UCSGEP-92-12.
1125	Adams, P.B. 1992. Canary rockfish. In: W.S. Leet, C.M. Dewees, and C.W. Haugen ( eds.), California's living marine resources and their utilization, p. 129. California Sea Grant Extension Publication UCSGEP-92-12.
1124	Adams, P.B. 1992. Copper rockfish. In: W.S. Leet, C.M. Dewees, and C.W. Haugen ( eds.), California's living marine resources and their utilization, p. 128. California Sea Grant Extension Publication UCSGEP-92-12.
1126	Adams, P.B., and J.E. Hardwick. 1992. Lingcod. In: W.S. Leet, C.M. Dewees, and C.W. Haugen ( eds.), California's living marine resources and their utilization, p. 161-164. California Sea Grant Extension Publication UCSGEP-92-12.
740	Anderson, D. W., D. G. Ainley, H. R. Carter, K. T. Briggs, and A. D. MacCall. 1992. Marine bird resources. In: W. S. Leet, C. M. Dewees, and C. W. Haugen (eds.), California's living marine resources and their utilization, p. 221-225. California Sea Grant, Sea Grant Extension Publication UCSGEP-92-12.
737	Barnes, J. T., L. D. Jacobson, A. D. MacCall, and P. Wolf. 1992. Recent population trends and abundance estimates for the Pacific sardine (Sardinops sagax). CalCOFI Reports 33:60-75.
593	Bence, J. R., D. Roberts, and W. H. Lenarz. 1992. An evaluation of the spatial distribution of fishes and invertebrates off Central California in relation to EPA study areas with emphasis on midwater ichthyofauna: based on National Marine Fisheries Service and CalCOFI survey data. Report to U.S. EPA Region IX (San Francisco, California). National Marine Fisheries Service, Tiburon, California. 234 p.
613	Bowers, M. J. 1992. Annual reproductive cycle of oocytes and embryos of yellowtail rockfish Sebastes flavidus (family Scorpaenidae). Fishery Bulletin 90(2):231-242.
709	Conlan, K. E., and J. R. Chess. 1992. Phylogeny and ecology of a kelp-boring amphipod, Peramphithoe stypotrupetes, new species (Corophioidea: Ampithoidae). Journal of Crustacean Biology 12(3):410-422.
679	Dayton, P. K., and A. D. MacCall. 1992. Pre-exploitation abundances of important large recreational and commercial fishes off southern California. In: California Sea Grant, Biennial report of completed projects 1988-1990, p. 91-96. California Sea Grant College Program, University of California, La Jolla, California.
147	Johnson, C. M., F. B. Schwing, S. Ralston, D. M. Husby, and W. H. Lenarz. 1992. The nearshore physical oceanography off the central California coast during April-June, 1988: a summary of CTD data from juvenile rockfish surveys. NOAA Technical Memorandum NMFS-SWFSC-174. 169 p.
692	Kope, R. G. 1992. Optimal harvest rates for mixed stocks of natural and hatchery fish. Canadian Journal of Fisheries and Aquatic Sciences 49(5):931-938.
583	Kope, Robert G. 1992. Evaluating management options for Klamath chinook. In: Salmon management in the 21st century: recovering stocks in decline. Proceedings of the 1992 Northeast Pacific Chinook and Coho Workshop (Boise, Idaho, September 28-30, 1992), p. 214-223. Presented by the Idaho Chapter of the American Fisheries Society, the University of Idaho Water Resources Research Institute, and the Western Division of the American Fisheries Society.
482	Laidig, T. E., and D. E. Pearson. 1992. Documentation of three computer programs used to assess daily age from the hard structures of animals. NOAA Technical Memorandum NMFS-SWFSC-168. 44 p.
591	Lenarz, W. 1992. Shortbelly rockfish. In: W. S. Leet, C. M. Dewees, and C. W. Haugen (eds.), California's living marine resources and their utilization, p. 126-127. California Sea Grant, Sea Grant Extension Publication UCSGEP-92-12.
592	Lenarz, W. 1992. Widow rockfish. In: W. S. Leet, C. M. Dewees, and C. W. Haugen (eds.), California's living marine resources and their utilization, p. 125-126. California Sea Grant, Sea Grant Extension Publication UCSGEP-92-12.
1249	MacCall, Alec D. 1992. Consideration of carrying capacity in relation to limits of artificial stock enhancement. NMFS/SWFSC Tiburon Laboratory, Tiburon, California. 14 p.
308	Marshall, W. H., and T. Wyllie Echeverria. 1992. Age, length, weight, reproductive cycle and fecundity of the monkeyface prickleback (Cebidichthys violaceus). California Fish and Game 78(2):57-64.
665	Okihiro, M. S., J. A. Whipple, J. M. Groff, and D.E. Hinton. 1992. Chromatophoromas and related hyperplastic lesions in Pacific rockfish (Sebastes spp.). Marine Environmental Research 34:53-57.
667	Ralston, S., and D. T. Tagami. 1992. An assessment of the exploitable biomass of Heterocarpus laevigatus in the main Hawaiian Islands. Part 1: Trapping surveys, depletion experiment, and length structure. Fishery Bulletin 90:494-504.
652	Reilly, C. A., T. Wyllie Echeverria, and S. Ralston. 1992. Interannual variation and overlap in the diets of pelagic juvenile rockfish (Genus: Sebastes) off central California. Fishery Bulletin 90(3):505-515.
738	Schneider, D. C., D. C. Duffy, A. D. MacCall, and D. W. Anderson. 1992. Seabird-fisheries interactions: evaluation with dimensionless ratios. In: D. R. McCullough and R. H. Barrett (eds.), Wildlife 2001: populations, p. 602-615. Elsevier Applied Science, London and New York.
739	Ueber, E., and A. D. MacCall. 1992. The rise and fall of the California sardine empire. In: M. Glantz (ed.), Climate variability, climate change, and fisheries, p. 31-48. Cambridge University Press, Cambridge, England.
603	Adams, P. B., and W. M. Samiere. 1991. A computerized "expert system" to aid in the identification of juvenile rockfish (genus Sebastes). In: T. E. Laidig and P. B. Adams (eds.), Methods used to identify pelagic juvenile rockfish (genus Sebastes) occurring along the coast of Central California, p. 47-57. NOAA Technical Memorandum NMFS-SWFSC-166.
1188	Adams, Peter B. 1991. Lingcod. In: Status of living marine resources of the Pacific coast of the United States as assessed in 1991, p. 16-17. NOAA Technical Memorandum NMFS-NWFSC-210.
989	Butler, J. L., W. W. Wakefield, P. B. Adams, B. H.Robison, and C. H. Baxter. 1991. Application of line transect methods to surveying demersal communities with ROVs and manned submersibles. Oceans '91: Ocean technologies and opportunities in the Pacific for the 90s: Proceedings (Honolulu, Hawaii, October 1991), vol. 2, p. 689-696.
486	Chess, J., E. Hobson, D. Howard, and R. DeFelice. 1991. The near-shore benthos off Point Molate, San Francisco Bay. NMFS SWFSC Administrative Report T-91-02. 8 p.
456	Eldridge, M. B., J. A. Whipple, M. J. Bowers, B. M. Jarvis, and J. Gold. 1991. Reproductive performance of yellowtail rockfish, Sebastes flavidus. In: G. W. Boehlert and J. Yamada, Rockfishes of the genus Sebastes: their reproduction and early life history. Environmental Biology of Fishes 30(1-2):91-102.
710	Gordoa, A., and J. E. Hightower. 1991. Changes in catchability in a bottom-trawl fishery for Cape hake (Merluccius capensis). Canadian Journal of Fisheries and Aquatic Sciences 48(10):1887-1895.
380	Hobson, E. S. 1991. Trophic relationships of fishes specialized to feed on zooplankters above coral reefs. In: P. F. Sale (ed.), The ecology of fishes on coral reefs, p. 69-95. Academic Press, San Diego, California.
480	Laidig, T. E., and P. B. Adams (eds.). 1991. Methods used to identify pelagic juvenile rockfish (genus Sebastes) occurring along the coast of Central California. NOAA Technical Memorandum NMFS-SWFSC-166. 180 p.
587	Laidig, T. E., and P. B. Adams. 1991. Introduction. In: T. E. Laidig and P. B. Adams (eds.), Methods used to identify pelagic juvenile rockfish (genus Sebastes) occurring along the coast of Central California, p. 1-5. NOAA Technical Memorandum NMFS-SWFSC-166.
589	Laidig, T. E., and W. M. Samiere. 1991. Pigment patterns of juvenile Sebastes flavidus and Sebastes melanops useful in identification. In: T. E. Laidig and P. B. Adams (eds.), Methods used to identify pelagic juvenile rockfish (genus Sebastes) occurring along the coast of Central California, p. 7-18. NOAA Technical Memorandum NMFS-SWFSC-166.
586	Laidig, T. E., S. Ralston, and J. R. Bence. 1991. Dynamics of growth in the early life history of shortbelly rockfish Sebastes jordani. Fishery Bulletin 89:611-621.
588	Laidig, T. E., W. M. Samiere, and R. C. Defelice. 1991. The use of the bones of the caudal complex to identify juvenile rockfish (Sebastes spp.). In: T. E. Laidig and P. B. Adams (eds.), Methods used to identify pelagic juvenile rockfish (genus Sebastes) occurring along the coast of Central California, p. 31-46. NOAA Technical Memorandum NMFS-SWFSC-166.
361	Lenarz, W. H., and T. Wyllie Echeverria. 1991. Sexual dimorphism in Sebastes. In: G. W. Boehlert and J. Yamada, Rockfishes of the genus Sebastes: their reproduction and early life history. Environmental Biology of Fishes 30(1-2):71-80.
594	Lenarz, W. H., R. J. Larson, and S. Ralston. 1991. Depth distributions of late larvae and pelagic juveniles of some fishes of the California Current. CalCOFI Reports 32:41-46.
741	MacCall, A. D. 1991. Jack Mackerel. In: Status of living marine resources of the Pacific coast of the United States as assessed in 1991, p. 43. NOAA Technical Memorandum NMFS-NWFSC-210.
161	McBride, A., and J. E. Hightower. 1991. Predicting sablefish age using otolith characteristics. NOAA Technical Memorandum NMFS-SWFSC-162. 19 p.
604	Moreland, S. L., and C. A. Reilly. 1991. Key to the juvenile rockfishes of Central California. In: T. E. Laidig and P. B. Adams (eds.), Methods used to identify pelagic juvenile rockfish (genus Sebastes) occurring along the coast of Central California, p. 59-180. NOAA Technical Memorandum NMFS-SWFSC-166.
481	Pearson, D. E., and J. E. Hightower. 1991. Spatial and temporal variability in growth of widow rockfish (Sebastes entomelas). NOAA Technical Memorandum NMFS-SWFSC-167. 43 p.
424	Pearson, D. E., J. E. Hightower, and J. T. H. Chan. 1991. Age, growth, and potential yield for shortbelly rockfish Sebastes jordani. Fishery Bulletin 89(3):403-409.
601	Sakuma, K. 1991. Addendum: Identification of the black dorsal spot group. In: T. E. Laidig and P. B. Adams (eds.), Methods used to identify pelagic juvenile rockfish (genus Sebastes) occurring along the coast of Central California, addendum p. 1-3. NOAA Technical Memorandum NMFS-SWFSC-166.
619	Schwing, F. B., and S. Ralston. 1991. Individual cast data for CTD stations conducted during cruise DSJ-89-04. NMFS SWFSC Administrative Report PFEG-91-01. 8 p. + appendices.
602	Silberberg, K. R. 1991. Identification of juvenile rockfish (genus Sebastes) using the cleithrum. In: T. E. Laidig and P. B. Adams (eds.), Methods used to identify pelagic juvenile rockfish (genus Sebastes) occurring along the coast of Central California, p. 19-30. NOAA Technical Memorandum NMFS-SWFSC-166.
723	Sudekum, A. E., J. D. Parrish, R. L. Radtke, and S. Ralston. 1991. Life history and ecology of large jacks in undisturbed, shallow, oceanic communities. Fishery Bulletin 89(3):493-513
153	Whipple, J. (ed.), and staff of the Tiburon Laboratory. 1991. Progress in rockfish recruitment studies. NMFS SWFSC Administrative Report T-91-01. 57 p.
664	Woodbury, D., and S. Ralston. 1991. Interannual variation in growth rates and back-calculated birthdate distributions of pelagic juvenile rockfishes (Sebastes spp.) off the central California coast. Fishery Bulletin 89:523-533.
303	Abramson, N. J. 1990. A test of using wind velocity data with a product estimator to improve the efficiency of sport salmon landings estimation. NMFS SWFSC Administrative Report T-90-04. 8 p.
299	Bence, J. R. 1990. Predicting year class strength from the abundance of age-0 rockfish: projections of statistical power. NMFS SWFSC Administrative Report T-90-01. 28 p.
435	Hightower, J. E. 1990. Biomass-based models and harvesting policies for Washington-Oregon-California rockfish stocks with correlated recruitment patterns. NOAA Technical Memorandum NMFS-SWFC-137. 39 p.
436	Hightower, J. E. 1990. Multispecies harvesting policies for Washington-Oregon-California rockfish trawl fisheries. Fishery Bulletin 88(4):645-656.
596	Hightower, J. E., and W. H. Lenarz. 1990. Status of the widow rockfish fishery in 1990. In: Status of the Pacific coast groundfish fishery through 1990 and recommended acceptable biological catches for 1991: stock assessment and fishery evaluation, appendix F (in Appendix Volume 2). Pacific Fishery Management Council, Portland, Oregon. 48 p.
256	Hobson, E. S., and E. H. Chave. 1990. Hawaiian reef animals (revised edition). University Press of Hawaii, Honolulu. 137 p.
359	MacCall, A. D. 1990. Dynamic geography of marine fish populations. Washington Sea Grant / University of Washington Press, Seattle, Washington. 153 p.
455	MacFarlane, R. B., H. R. Harvey, M. J. Bowers, and J. F. Patton. 1990. Serum lipoproteins in striped bass (Morone saxatilis): effects of starvation. Canadian Journal of Fisheries and Aquatic Sciences 47(4):739-745.
378	Matsui, T., S. Kato, and S. E. Smith. 1990. Biology and potential use of Pacific grenadier, Coryphaenoides acrolepis, off California. Marine Fisheries Review 52(3):1-17.
300	Parker, K. R., and A. D. MacCall. 1990. An interactive port sampling model for California groundfish. NMFS SWFSC Administrative Report T-90-03. 32 p.
343	Pearson, D. E., and S. Ralston. 1990. Trends in landings, species composition, length-frequency distributions, and sex ratios of 11 rockfish species (genus Sebastes) from central and northern California ports (1978-1988). NOAA Technical Memorandum NMFS-SWFC-145. 65 p.
128	Pearson, D. E., and S. Ralston. 1990. Trends in length composition and landings in the California commercial rockfish fishery from 1978-1988. In: Status of the Pacific coast groundfish fishery through 1990 and recommended acceptable biological catches for 1991, appendix K. Pacific Fishery Management Council, Portland, Oregon.
611	Prager, M. H., and A. D. MacCall. 1990. Biostatistical models of contaminant and climate influences on fish populations of the Southern California Bight. Report to Ocean Assessments Division, U. S. National Ocean Service. Old Dominion University Technical Report 90-04.
221	Ralston, S., A. D. MacCall, and D. E. Pearson. 1990. Reduction in mean length and exploitation of central and northern California rockfish. In: Status of the Pacific coast groundfish fishery through 1990 and recommended acceptable biological catches for 1991, appendix L. Pacific Fishery Management Council, Portland, Oregon. 4 p.
315	Ralston, S., and W. H. Lenarz. 1990. Interspecific synchrony in the dynamics of pelagic juvenile rockfish from the Gulf of the Farallones (1983-90). EOS, Transactions, American Geophysical Union 71:1350.
485	Reilly, C. A., and J. R. Bence. 1990. Documentation and management of data from trawl surveys of pelagic young-of-the-year rockfishes. NMFS SWFSC Administrative Report T-90-06. 68 p.
595	Schwing, F. B., D. M. Husby, D. E. Tracy, S. V. Ralston, and W. H. Lenarz. 1990. Hydrographic conditions in the Gulf of the Farallones following the spring transition. Eos, Transactions, American Geophysical Union 71:1350.
484	Schwing, F. B., S. Ralston, D. M. Husby, and W. H. Lenarz. 1990. The nearshore physical oceanography off the Central California coast during May-June 1989: a summary of CTD data from juvenile rockfish surveys. NOAA Technical Memorandum NMFS-SWFSC-153. 142 p.
262	Smith, S. E., and N. J. Abramson. 1990. Leopard shark Triakis semifasciata distribution, mortality rate, yield, and stock replenishment estimates based on a tagging study in San Francisco Bay. Fishery Bulletin 88(2):371-381.
301	Staff of the Tiburon Laboratory (S. Ralston, ed.). 1990. Progress in rockfish recruitment studies. NMFS SWFSC Administrative Report T-90-02. 45 p.
742	Ueber, E., and A. MacCall. 1990. The collapse of California's sardine fishery. In: M. H. Glantz and L. E. Feingold (eds.), Climate variability, climate change and fisheries, p. 17-23. National Center for Atmospheric Research, Boulder, Colorado.
145	Woods, M. H. 1990. Publications of the Southwest Fisheries Science Center, Tiburon Laboratory. NMFS SWFSC Administrative Report T-90-05. 55 p.
360	Wyllie Echeverria, T., W. H. Lenarz, and C. A. Reilly. 1990. Survey of the abundance and distribution of pelagic young-of-the-year rockfishes, Sebastes, off central California. NOAA Technical Memorandum NMFS-SWFC-147. 125 p.
499	Bohnsack, James A., Herb Kumpf, Edmund Hobson, Gene Huntsman, Kenneth W. Able, and Stephen V. Ralston. 1989. Report on the concept of marine wilderness. Fisheries 14(5):22-24.
461	Chess, J. R. 1989. Aciconula acanthosoma, new species, a caprellid amphipod from southern California, with notes on its ecology. Journal of Crustacean Biology 9(4):662-665.
302	Chess, J., E. Hobson, D. Howard, B. Jarvis, C. Reilly, and W. Samiere. 1989. Biota of a shallow estuarine habitat in San Francisco Bay. NMFS SWFSC Administrative Report T-89-02. 23 p.
446	Eldridge, Maxwell B. 1989. Life history strategies and tactics of striped bass (Morone saxatilis) Walbaum. Ph.D. thesis, Oregon State University, Corvallis. 145 p.
421	Hightower, J. E., and W. H. Lenarz. 1989. Optimal harvesting policies for the widow rockfish fishery. In: E. F. Edwards and B. A. Megrey (eds.), Mathematical analysis of fish stock dynamics, p. 83-91. American Fisheries Society Symposium 6.
422	Hightower, J. E., and W. H. Lenarz. 1989. Status of widow rockfish fishery. In: Status of the Pacific Coast groundfish fishery through 1989 and recommended acceptable biological catches for 1990, appendix C. Pacific Fishery Management Council, Portland, Oregon.
423	Hightower, J. E., and W. H. Lenarz. 1989. Using GENMOD to develop harvesting policies for multiaged fish stocks. In: E. F. Edwards and B. A. Megrey (eds.), Mathematical analysis of fish stock dynamics, p. 209-210. American Fisheries Society Symposium 6.
392	Hobson, E. S. 1989. Predation on ocean krill. Science 243(4888):237-238.
255	Hobson, E. S., and D. F. Howard. 1989. Mass strandings of juvenile shortbelly rockfish and Pacific hake along the coast of northern California. California Fish and Game 75(3):169-172.
355	Lapointe, M. F., R. M. Peterman, and A. D. MacCall. 1989. Trends in fishing mortality rate along with errors in natural mortality can cause spurious time trends in fish stock abundances estimated by virtual population analysis (VPA). Canadian Journal of Fisheries and Aquatic Sciences 46(12):2129-2139.
356	Lluch-Belda, D., R. J. M. Crawford, T. Kawasaki, A. D. MacCall, R. H. Parrish, R. A. Schwartzlose, and P. E. Smith. 1989. World-wide fluctuations of sardine and anchovy stocks: the regime problem. South African Journal of Marine Science 8:195-205.
357	MacCall, A. D. 1989. Against marine fish hatcheries: ironies of fishery politics in the technological era. CalCOFI Reports 30:46-48.
358	MacCall, Alec D. 1989. Ecosystems of the world 27: Continental shelves, edited by H. Postma and J.J. Zijlstra [book review]. Trends in Ecology and Evolution 4(10):313-314.
342	Pearson, D. E. 1989. Survey of fishes and water properties of South San Francisco Bay, California, 1973-82. NOAA Technical Report NMFS 78. 21 p.
228	Staff of the Tiburon Laboratory. 1989. Progress in rockfish recruitment studies. NMFS SWFSC Administrative Report T-89-01. 45 p.
320	Ueber, E. 1989. Xanthic, gigantic, China rockfish. California Fish and Game 75(1):47-48.
268	Adams, Peter Burton 1988. Trophic and life history considerations with respect to multispecies management policies. Ph.D. thesis, University of California, Davis. 214 p.
272	Briggs, K.T., D.G. Ainley, L.B. Spear, P.B. Adams, and S.E. Smith. 1988. Distribution and diet of Cassin's auklet and common murre in relation to central California upwellings. In: Henri Ouellet (ed.), Acta, XIX Congressus Internationalis Ornithologici [Proceedings of the 19th International Ornithological Congress] (Ottawa, Canada, 22-29, VI, 1986), Volume I, p. 982-990. University of Ottawa Press.
473	Chess, J. R., S. E. Smith, and P. C. Fischer. 1988. Trophic relationships of the shortbelly rockfish, Sebastes jordani, off central California. CalCOFI Reports 29:129-136.
474	Hobson, E. S., and J. R. Chess. 1988. Trophic relations of the blue rockfish, Sebastes mystinus, in a coastal upwelling system off northern California. Fishery Bulletin 86(4):715-743.
374	Leet, M. H., and C. A. Reilly. 1988. Annotated bibliography of the genus Sebastes (Family Scorpaenidae). Pacific Marine Fisheries Commission, Portland, Oregon. 249 p.
432	Lenarz, W. H., and J. E. Hightower. 1988. Status of the widow rockfish fishery. In: Status of the Pacific Coast groundfish fishery through 1988 and recommended acceptable biological catches for 1989, Appendix C. Pacific Fishery Management Council, Portland, Oregon.
351	MacCall, A. D., and M. H. Prager. 1988. Historical changes in abundance of six fish species off southern California, based on CalCOFI egg and larva samples. CalCOFI Reports 29:91-101.
420	Methot, R., and J. E. Hightower. 1988. Status of the Washington-Oregon-California sablefish stock in 1988. In: Status of the Pacific Coast groundfish fishery through 1988 and recommended acceptable biological catches for 1989, appendix B. Pacific Fishery Management Council, Portland, Oregon.
377	Okada, M., T. Machino, and S. Kato. 1988. "Bone softening," a practical way to utilize small fish. Marine Fisheries Review 50(3):1-7.
352	Prager, M. H., and A. D. MacCall. 1988. Revised estimates of historical spawning biomass of the Pacific mackerel, Scomber japonicus. CalCOFI Reports 29:81-90.
354	Reed, R. J., and A. D. MacCall. 1988. Changing the size limit: how it could affect California halibut fisheries. CalCOFI Reports 29:158-166.
346	Setzler-Hamilton, E. M., J. A. Whipple, and R. B. MacFarlane. 1988. Striped bass populations in Chesapeake and San Francisco Bays: two environmentally impacted estuaries. Marine Pollution Bulletin 19(9):466-477.
235	Smith, S. E., and P. B. Adams. 1988. Daytime surface swarms of Thysanoessa spinifera (Euphausiacea) in the Gulf of the Farallones, California. Bulletin of Marine Science 42(1):76-84.
231	Staff of the Tiburon Laboratory. 1988. Progress in rockfish recruitment studies. NMFS SWFSC Administrative Report T-88-01. 40 p.
323	Ueber, E. 1988. The traditional central California setnet fishery. Marine Fisheries Review 50(2):40-48.
267	Adams, P. B. 1987. The diet of widow rockfish Sebastes entomelas in Northern California. In: W. H. Lenarz and D. R. Gunderson (eds.), Widow rockfish: proceedings of a workshop, Tiburon, California, December 11-12, 1980, p. 37-41. NOAA Technical Report NMFS 48.
307	Barss, W. H., and T. W. Echeverria. 1987. Maturity of widow rockfish Sebastes entomelas from the northeastern Pacific, 1977-1982. In: W. H. Lenarz and D. R. Gunderson (eds.), Widow rockfish: proceedings of a workshop, Tiburon, California, December 11-12, 1980, p. 13-18. NOAA Technical Report NMFS 48.
475	Cooperrider, C. L. 1987. Commercial passenger fishing vessel landings of widow rockfish Sebastes entomelas in Central California. In: W. H. Lenarz and D. R. Gunderson (eds.), Widow rockfish: proceedings of a workshop, Tiburon, California, December 11-12, 1980, p. 49-52. NOAA Technical Report NMFS 48.
312	Echeverria, T. W. 1987. Relationship of otolith length to total length in rockfishes from northern and central California. Fishery Bulletin 85(2):383-387.
430	Hightower, J. E., and W. H. Lenarz. 1987. Status of the widow rockfish fishery. In: Status of the Pacific Coast groundfish fishery through 1987 and recommended acceptable biological catches for 1988, Appendix C. Pacific Fishery Management Council, Portland, Oregon.
364	Kendall, A. W., and W. H. Lenarz. 1987. Status of early life history studies of Northeast Pacific rockfishes. In: Proceedings of the International Rockfish Symposium (October 1986, Anchorage, Alaska), p. 99-128. University of Alaska, Sea Grant Report 87-2.
165	Larson, R. J. (ed.), and the staff of the Tiburon Laboratory. 1987. Progress in rockfish recruitment studies. NMFS SWFSC Administrative Report T-87-01. 31 p.
373	Lenarz, W. H. 1987. A history of California rockfish fisheries. In: Proceedings of the International Rockfish Symposium (October 1986, Anchorage, Alaska), p. 35-41. University of Alaska, Sea Grant Report 87-2.
372	Lenarz, W. H. 1987. Ageing and growth of widow rockfish. In: W. H. Lenarz and D. R. Gunderson (eds.), Widow rockfish: proceedings of a workshop, Tiburon, California, December 11-12, 1980, p. 31-35. NOAA Technical Report NMFS 48.
525	Lenarz, W. H., and D. R. Gunderson. 1987. Widow rockfish workshop: introduction. In: W. H. Lenarz and D. R. Gunderson (eds.), Widow rockfish: proceedings of a workshop, Tiburon, California, December 11-12, 1980, p. 1. NOAA Technical Report NMFS 48.
365	Lenarz, William H., and Donald R. Gunderson (eds.). 1987. Widow rockfish: proceedings of a workshop (Tiburon, California, December 11-12, 1980). NOAA Technical Report NMFS 48. 57 p.
708	Murano, M., and J. R. Chess. 1987. Four new mysids from Californian coastal waters. Journal of Crustacean Biology 7(1):182-197.
322	Ueber, E. 1987. Widow rockfish fishery. In: W. H. Lenarz and D. R. Gunderson (eds.), Widow rockfish: proceedings of a workshop, Tiburon, California, December 11-12, 1980, p. 53-56. NOAA Technical Report NMFS 48.
297	Whipple, J. A., R. B. MacFarlane, M. B. Eldridge, and P. Benville, Jr.. 1987. The impacts of estuarine degradation and chronic pollution on populations of anadromous striped bass (Morone saxatilis) in the San Francisco Bay-Delta, California: a summary. In: D. M. Goodrich (ed.), San Francisco Bay: issues, resources, status, and management (proceedings of a seminar held November 22, 1985, Washington, DC), p. 77-106. NOAA Estuary-of-the-Month Seminar Series no. 6. NOAA Estuarine Program Office, Washington, D.C.
311	Wyllie Echeverria, T. 1987. Thirty-four species of California rockfishes: maturity and seasonality of reproduction. Fishery Bulletin 85(2):229-250.
266	Adams, P. B. 1986. Stock assessment of lingcod (Ophiodon elongatus) of Washington and Oregon. In: Status of the Pacific coast groundfish fishery through 1986 and recommended acceptable biological catches for 1987, Appendix 7. Pacific Fishery Management Council, Portland, Oregon.
362	Epperly, S. P., W. H. Lenarz, L. L. Massey, and W. R. Nelson. 1986. A generalized computer program for yield per recruit analysis of a migrating population with area specific growth and mortality rates. NOAA Technical Memorandum NMFS-SEFC-180. 26 p.
434	Hightower, J. E. 1986. Sampling strategies for the Washington-Oregon-California sablefish fishery. NOAA Technical Memorandum NMFS-SWFC-63. 43 p.
428	Hightower, J. E., and W. H. Lenarz. 1986. Status of the widow rockfish fishery. In: Status of the Pacific Coast groundfish fishery through 1986 and recommended acceptable biological catches for 1987, Appendix 4. Pacific Fishery Management Council, Portland, Oregon
390	Hobson, E. S. 1986. Impacts of changing habitats in latitudinal variations in trophic systems of teleostean fishes. In: G. W. Potts (ed.), Behavioural ecology of underwater organisms: report of the 19th Symposium of the Underwater Association for Scientific Research (British Museum, March 22nd-23rd, 1985), p. 33-39. Progress in Underwater Science 11.
391	Hobson, E. S. 1986. Predation on the Pacific sand lance, Ammodytes hexapterus (Pisces: Ammodytidae), during the transition between day and night in southeastern Alaska. Copeia 1986(1):223-226.
471	Hobson, E. S., and J. R. Chess. 1986. Diel movements of resident and transient zooplankters above lagoon reefs at Enewetak Atoll, Marshall Islands. Pacific Science 40(1-4):7-26.
472	Hobson, E. S., and J. R. Chess. 1986. Relationships among fishes and their prey in a nearshore sand community off southern California. Environmental Biology of Fishes 17(3):201-226.
229	Hobson, E., P. Adams, J. Chess, D. Howard, and W. Samiere. 1986. Temporal and spatial variations in the numbers of first-year juvenile rockfishes off northern California. NMFS SWFSC Administrative Report T-86-02. 16 p.
173	Leet, W. S., R. E. Green, and D. Ralph. 1986. Pen rearing Pacific salmon, Oncorhynchus spp., in San Francisco Bay. Marine Fisheries Review 48(1):24-31.
363	Lenarz, W. H., and T. Wyllie Echeverria. 1986. Comparison of visceral fat and gonadal fat volumes of yellowtail rockfish, Sebastes flavidus, during a normal year and a year of El Nino conditions. Fishery Bulletin 84(3):743-745.
296	MacFarlane, R. B., and P. E. Benville, Jr. 1986. Primary and secondary stress responses of striped bass (Morone saxatilis) exposed to benzene. Marine Biology 92:245-254.
327	Reilly, Carol A. 1986. Identification of carotenoid pigments in striped bass (Morone saxatilis) ovaries. Master's thesis, San Francisco State University. 43 p.
194	Ryan, C. J. 1986. Feeding habits of brown rockfish, Sebastes auriculatus, associated with a dock in San Francisco Bay, California. Master's thesis, San Francisco State University, California. 88 p.
17	Sen, A. R. 1986. Methodological problems in sampling commercial rockfish landings. Fishery Bulletin 84(2):409-421.
230	Smith, S. E., and N. J. Abramson. 1986. Report of a meeting on west coast groundfish research coordination. NMFS SWFSC Administrative Report T-86-01. 23 p.
321	Ueber, E. 1986. Fillet yields of Dover sole versus depth of capture and length. North American Journal of Fisheries Management 6(2):282-284.
310	Wyllie Echeverria, T. 1986. Sexual dimorphism in four species of rockfish genus Sebastes (Scorpaenidae). Environmental Biology of Fishes 15(3):181-190.
295	Benville, P. E., Jr., J. A. Whipple, and M. B. Eldridge. 1985. Acute toxicity of seven alicyclic hexanes to striped bass, Morone saxatilis, and bay shrimp, Crangon franciscorum, in seawater. California Fish and Game 71(3):132-140.
370	Guillemot, P. J., R. J. Larson, and W. H. Lenarz. 1985. Seasonal cycles of fat and gonad volume in five species of northern California rockfish (Scorpaenidae: Sebastes). Fishery Bulletin 83(3):299-311.
232	Kato, S. 1985. Report on trip to Japan and Taiwan. NMFS SWFSC Administrative Report T-85-01. 13 p.
376	Kato, S., and S. C. Schroeter. 1985. Biology of the red sea urchin, Strongylocentrotus franciscanus, and its fishery in California. Marine Fisheries Review 47(3):1-20.
597	Lenarz, W. H. 1985. Theoretical first approximations of densities of discarded webbing in the eastern North Pacific Ocean and Bering Sea. In: R. S. Shomura and H. O. Yoshida (eds.), Proceedings of the Workshop on the Fate and Impact of Marine Debris (26-29 November 1984, Honolulu, Hawaii), p. 213-217. NOAA Technical Memorandum NMFS-SWFC-54.
233	Lenarz, W., and S. Moreland (eds.). 1985. Progress report on rockfish recruitment studies at the Tiburon Laboratory. NMFS SWFSC Administrative Report T-85-02. 19 p.
427	Lenarz, William H., and Joseph E. Hightower. 1985. Status of the widow rockfish fishery. In: Status of the Pacific Coast groundfish fishery through 1985 and recommended acceptable biological catches for 1986, appendix 3. Pacific Fishery Management Council, Portland, Oregon.
332	Moser, M., J. A. Sakanari, C. A. Reilly, and J. A. Whipple. 1985. Prevalence, intensity, longevity and persistence of Anisakis sp. larvae and Lacistorhynchus tenuis metacestodes in San Francisco striped bass. NOAA Technical Report NMFS 29. 4 p.
598	Echeverria, T., and W. H. Lenarz. 1984. Conversions between total, fork, and standard lengths in 35 species of Sebastes from California. Fishery Bulletin 82(1):249-251.
389	Hobson, E. S. 1984. The structure of reef fish communities in the Hawaiian archipelago. In. R. W. Grigg and K. Y. Tanoue (eds.), Proceedings of the Second Symposium on Resource Investigations in the Northwestern Hawaiian Islands, vol. 1, p. 101-122. University of Hawaii Sea Grant College Program, Honolulu, HI. UNIHI-SEAGRANT-MR-84-01.
309	Jung, Marvin, Jeannette A. Whipple, and L. Michael Moser. 1984. Summary report of the Cooperative Striped Bass Study (COSBS): a study of the effects of pollutants on the San Francisco Bay-Delta striped bass fishery. Institute for Aquatic Resources, Santa Cruz, California. 100 p.
350	MacFarlane, R. B. 1984. Determination of corticosteroids in fish plasma by high performance liquid chromatography: evaluation of the method using striped bass (Morone saxatilis). Canadian Journal of Fisheries and Aquatic Sciences 41(9):1280-1286.
325	Smith, S. E. 1984. Timing of vertebral-band deposition in tetracycline-injected leopard sharks. Transactions of the American Fisheries Society 113:308-313.
306	Whipple, J. A. 1984. The impact of estuarine degradation and chronic pollution on populations of anadromous striped bass (Morone saxatilis) in the San Francisco Bay-Delta, California: a summary for managers and regulators. NMFS SWFSC Administrative Report T-84-01. 47 p.
207	Whipple, J. A., M. Jung, R. B. MacFarlane, and R. Fischer. 1984. Histopathological manual for monitoring health of striped bass in relation to pollutant burdens. NOAA Technical Memorandum NMFS-SWFC-46. 92 p.
438	Eldridge, M. B., J. D. Joseph, K. M. Taberski, and G. T. Seaborn. 1983. Lipid and fatty acid compositions of the endogenous energy sources of striped bass (Morone saxatilis) eggs. Lipids 18:510-513.
305	Fougner, S., and N. J. Abramson. 1983. Report of a workshop on sablefish research needs. NMFS SWFSC Administrative Report T-83-02. 32 p.
260	Kato, S. 1983. An overview of California squid fisheries and California light fishery. In: Proceedings of the West Coast Squid Symposium, February 1-2, 1983, Newport, Oregon, p. 23-27. West Coast Fisheries Development Foundation and Oregon State University Sea Grant Marine Advisory Program.
304	Kato, S. 1983. Guide to underutilized species of California. NMFS SWFSC Administrative Report T-83-01. 26 p.
329	Moser, M., J. Whipple, J. Sakanari, and C. Reilly. 1983. Protandrous hermaphroditism in striped bass from Coos Bay, Oregon. Transactions of the American Fisheries Society 112:567-569.
318	Whipple, Jeannette A., Donald G. Crosby, and Marvin Jung. 1983. Third progress report: Cooperative Striped Bass Study. California State Water Resources Control Board, Toxic Substances Control Program, Special Projects Report 83-3SP. 208 p.
265	Adams, P. B. 1982. Feeding behavior of the widow rockfish (Sebastes entomelas), a diurnally feeding rockfish. In: G. M. Cailliet and C. A. Simenstad (eds.), Gutshop '81, p. 198-210. Washington Sea Grant Publication WSG-WO 82-2.
271	Adams, P. B., and C. J. Ryan. 1982. Morphology and growth of a pugheaded brown rockfish, Sebastes auriculatus. California Fish and Game 68(1):54-57.
460	Chess, J. R. 1982. Predator-prey studies of the shortbelly rockfish: offshore sampling problems. In: G. M. Cailliet and C. A. Simenstad (eds.), Gutshop '81: fish food habit studies, p. 58-62. Proceedings of the Third Pacific Northwest Technical Workshop. Sea Grant Publication, University of Washington, Seattle.
454	Eldridge, M. B., J. A. Whipple, and M. J. Bowers. 1982. Bioenergetics and growth of striped bass, Morone saxatilis, embryos and larvae. Fishery Bulletin 80(3):461-474.
388	Hobson, E. S. 1982. The structure of fish communities on warm-temperate and tropical reefs. In: G. R. Huntsman, W. R. Nicholson, and W. W. Fox, Jr. (eds.), The biological bases for reef fishery management, p. 160-166. NOAA Technical Memorandum NMFS-SEFC-80.
349	MacFarlane, R. B. 1982. A fisheries view of the drain. Fremontia 10:37.
344	MacFarlane, R. B., and J. A. Whipple. 1982. The striped bass (Morone saxatilis) as an indicator of water quality in the San Francisco Bay-Delta system. In: Michael J. Herz and Scott McCreary (eds.), Proceedings: the State of the Bay Conference (California Academy of Sciences, June 4, 1982), p. 81-134. Oceanic Society, San Francisco Bay Chapter, San Francisco, California.
328	Reilly, C. A., and J. Sakanari. 1982. Record of striped mullet, Mugil cephalus, in San Francisco Bay, California. California Fish and Game 68(3):190.
164	Smith, S. 1982. NOAA's fishery research laboratory at Tiburon: history of the site and present activities. NMFS SWFSC Administrative Report T-82-01. 10 p.
291	Benville, P. E., T. G. Yocom, P. Nunes, and J. M. O'Neill. 1981. Simple, continuous-flow systems for dissolving the water-soluble components of crude oil into sea-water for acute or chronic exposure of marine organisms. Water Research 15:1197-1204.
453	Eldridge, M. B., J. A. Whipple, D. Eng, M. J. Bowers, and B. M. Jarvis. 1981. Effects of food and feeding factors on laboratory-reared striped bass larvae. Transactions of the American Fisheries Society 110(1):111-120.
445	Eldridge, M. B., J. Whipple, and D. Eng. 1981. Endogenous energy sources as factors affecting mortality and development in striped bass (Morone saxatilis) eggs and larvae. In: R. Lasker and K. Sherman (eds.), The early life history of fish: recent studies (the second ICES symposium, Woods Hole, 2-5 April 1979), p. 568-570. Rapports et Procès-verbaux des Réunions 178 (Conseil International pour l'Exploration de la Mer).
292	Eldridge, M. B., P. E. Benville, and J. A. Whipple. 1981. Physiologic responses of striped bass (Morone saxatilis) embryos and larvae to low, sublethal concentrations or the aromatic hydrocarbon benzene. Proceedings of the Gulf and Caribbean Fisheries Institute 33:52-68
470	Hobson, E. S., W. N. McFarland, and J. R. Chess. 1981. Crepuscular and nocturnal activities of California nearshore fishes, with consideration of their scotopic visual pigments and the photic environment. Fishery Bulletin 79(1):1-30.
259	Kato, S. 1981. Checking out shortbelly rockfish: Colintino Rose II's mission accomplished. Pacific Fishing 2(10):96-100.
293	Whipple, J. A., M. B. Eldridge, and P. Benville. 1981. An ecological perspective of the effects of monocyclic aromatic hydrocarbons on fishes. In: F. J. Vernberg, et al. (eds.), Biological monitoring of marine pollutants, p. 483-551. Academic Press, New York.
294	Whipple, J., M. Eldridge, P. Benville, M. Bowers, B. Jarvis, and N. Stapp. 1981. The effect of inherent parental factors on gamete condition and viability in striped bass (Morone saxatilis). In: R. Lasker and K. Sherman (eds.), The early life history of fish: recent studies (the second ICES symposium, Woods Hole, 2-5 April 1979), p.93-94. Rapports et Procès-verbaux des Réunions 178 (Conseil International pour l'Exploration de la Mer).
317	Whipple, Jeannette, and Marvin Jung. 1981. Cooperative Striped Bass Study (COSBS), Appendix 1: Procedures for histopathological examinations, autopsies and subsampling of striped bass. California State Water Resources Control Board, Toxic Substances Control Program, Sacramento, California. 46 p.
263	Adams, P. B. 1980. Life history patterns in marine fishes and their consequences for fisheries management. Fishery Bulletin 78(1):1-12.
264	Adams, P. B. 1980. Morphology and distribution patterns of several important species of rockfish (genus Sebastes). Marine Fisheries Review 42(3-4):80-82.
369	Baglin, R. E., Jr., M. I. Farber, W. H. Lenarz, and J. J. Mason, Jr. 1980. Shedding rates of plastic and metal dart tags from Atlantic bluefin tuna, Thunnus thynnus. Fishery Bulletin 78:179-185.
148	Echeverria, T. 1980. Accumulation of 14C labeled benzene and related compounds in the rotifer Brachionus plicatilis from seawater. Canadian Journal of Fisheries and Aquatic Sciences 37(4):738-741.
705	Gunderson, D. R., and W. H. Lenarz (eds.). 1980. Cooperative survey of rockfish and whiting resources off California, Washington, and Oregon, 1977 [special issue]. Marine Fisheries Review 42(3-4):1-88.
706	Gunderson, D. R., and W. H. Lenarz. 1980. Cooperative survey of rockfish and whiting resources off California, Washington, and Oregon, 1977: introduction. Marine Fisheries Review 42(3-4):1.
387	Hobson, E. S. 1980. The structure of reef fish communities in the Hawaiian archipelago: interim status report. In: R. W. Grigg and R. T. Pfund (eds.), Proceedings of the symposium on status of resource investigations in the northwestern Hawaiian Islands, p. 57-70. University of Hawaii Sea Grant Program, UNIHI-SEAGRANT-MR-80-04.
371	Lenarz, W. H. 1980. Shortbelly rockfish, Sebastes jordani: a large unfished resource in waters off California. Marine Fisheries Review 42(3-4):34-40.
270	Lenarz, W. H., and P. B. Adams. 1980. Some statistical considerations of the design of trawl surveys for rockfish (Scorpaenidae). Fishery Bulletin 78(3):659-674.
459	Chess, J. R. 1979. Some procedures for assessing organisms associated with rocky substrata. In: Sandy J. Lipovsky and Charles A. Simenstad (eds.), Gutshop '78: Fish food habits studies: Proceedings of the Second Pacific Northwest Technical Workshop (October 10-13, 1978, Lake Wilderness Conference Center, Maple Valley, Washington), p. 25-28. Washington Sea Grant Publication WSG-WO-79-1, University of Washington, Seattle.
386	Hobson, E. S. 1979. Interactions between piscivorous fishes and their prey. In: H. Clepper (ed.), Predator-prey systems in fisheries management (International Symposium on Predator-Prey Systems in Fish Communities and their Role in Fisheries Management, Atlanta, Georgia, July 24-27, 1978), p. 231-242. Sport Fishing Institute, Washington, DC.
468	Hobson, E. S., and J. R. Chess. 1979. Zooplankters that emerge from the lagoon floor at night at Kure and Midway Atolls, Hawaii. Fishery Bulletin 77(1):275-280.
289	Nunes, P., and P. E. Benville, Jr. 1979. Uptake and depuration of petroleum hydrocarbons in the Manila clam, Tapes semidecussata Reeve. Bulletin of Environmental Contamination and Toxicology 21:719-726.
288	Nunes, P., and P. E. Benville. 1979. Effects of the water-soluble fraction of Cook Inlet crude oil on the marine alga, Dunalliela tertiolecta. Bulletin of Environmental Contamination and Toxicology 21:727-732.
469	Randall, J. E., and J. R. Chess. 1979. A new species of garden eel (Congridae: Heterocongrinae) of the genus Gorgasia from Hawaii. Pacific Science 33(1):17-23.
324	Smith, S. E. 1979. Changes in saltwater angling methods and gear in California. Marine Fisheries Review 41(9):32-44.
208	Smith, S. E., and S. Kato. 1979. The fisheries of San Francisco Bay: past, present and future. In: T. John Conomos (ed.), San Francisco Bay: the urbanized estuary, p. 445-468. American Association for the Advancement of Science, Pacific Division, San Francisco, California.
290	Whipple, Jeannette A., Thomas G. Yocom, D. Ross Smart, Meryl H. Cohen, Pete E. Benville, Jr., and Martha E. Ture. 1979. Transport, retention, and effects of the water-soluble fraction of Cook Inlet crude oil in experimental food chains. In: Environmental assessment of the Alaskan continental shelf: final reports of principal investigators. Physical science studies vol. 1, p. 535-581. NOAA Outer Continental Shelf Environmental Assessment Program, Boulder, Colorado.
316	Wolfe, D. A., J. W. Farrington, M. Katz, W. D. MacLeod, Jr., D. S. Miller, D. J. Reish, D. L. Swanson, J. A. Whipple, and T. G. Yocom. 1979. Oil and grease. In: A review of the EPA Red Book: quality criteria for water, p. 163-168. American Fisheries Society, Water Quality Section, Bethesda, Maryland.
458	Chess, J. R. 1978. An airlift sampling device for in situ collecting of biota from rocky substrata. Marine Technology Society Journal 12(3):20-23.
444	Eldridge, M. B., T. Echeverria, and S. Korn. 1978. Fate of C14-benzene in eggs and larvae of Pacific herring (Clupea harengus pallasi). Journal of the Fisheries Research Board of Canada 35(6):861-865.
467	Hobson, E. S., and J. R. Chess. 1978. Trophic relationships among fishes and plankton in the lagoon at Enewetak Atoll, Marshall Islands. Fishery Bulletin 76(1):133-153.
401	Hobson, Edmund S. 1978. Aggregating as a defense against predators in aquatic and terrestrial habitats. In: E. S. Reese and F. J. Lighter (eds.), Contrasts in behavior: adaptations in the aquatic and terrestrial environments, p. 219-234. Wiley, New York.
284	Nunes, Pepsi, and Pete E. Benville, Jr. 1978. Acute toxicity of the water-soluble fraction of Cook Inlet crude oil to the Manila clam. Marine Pollution Bulletin 9(12):324-331.
151	Whipple, J. A., T. G. Yocom, D. R. Smart, and M. H. Cohen. 1978. Effects of chronic concentations of petroleum hydrocarbons on gonadal maturation in starry flounder (Platichthys stellatus [Pallas]). In: Proceedings of the Conference on Assessment of Ecological Impacts of Oil Spills (14-17 June 1978, Keystone, Colorado), p. 757-806. American Institute of Biological Sciences.
287	Whipple, Jeannette A., Thomas G. Yocom, Peter E. Benville, D. Ross Smart, Meryl H. Cohen, and Martha E. Ture. 1978. Transport, retention, and effects of the water-soluble fraction of Cook Inlet crude oil in experimental food chains (RU 389). In: Douglas A. Wolfe (ed.), Marine biological effects of OCS petroleum development: a program review of research supported under the NOAA Outer Continental Shelf Environmental Assessment Program (November 29 - December 1, 1977), p. 106-129. NOAA Technical Memorandum ERL OCSEAP-1.
283	Benville, P. E., and S. Korn. 1977. The acute toxicity of six monocyclic aromatic crude oil components to striped bass (Morone saxatilis) and bay shrimp (Crago franciscorum). California Fish and Game 63(4):204-209.
477	Eldridge, M. B. 1977. Factors influencing distribution of fish eggs and larvae over eight 24-hr samplings in Richardson Bay, California. California Fish and Game 63:101-116.
452	Eldridge, M. B., and T. Echeverria. 1977. Fate of C14-benzene (an aromatic hydrocarbon of crude oil) in a simple food chain of rotifers and Pacific herring larvae. Cal-Neva Wildlife, Transactions 13:90-96.
298	Eldridge, M. B., D. J. King, D. Eng, and M. J. Bowers. 1977. Role of the oil globule in survival and growth of striped bass (Morone saxatilis) larvae. Proceedings of the Western Association of Fish and Wildlife Agencies 57:303-313.
443	Eldridge, M. B., T. Echeverria, and J. A. Whipple. 1977. Energetics of Pacific herring (Clupea harengus pallasi) embryos and larvae exposed to low concentrations of benzene, a monoaromatic component of crude oil. Transactions of the American Fisheries Society 106:452-461.
379	Hobson, E. S., and W. H. Lenarz. 1977. Report of a colloquium on the multispecies fisheries problem, June 1976. Marine Fisheries Review 39(9):8-13.
660	Korn, S., N. Hirsch, and J. W. Struhsaker. 1977. The uptake, distribution, and depuration of 14C benzene and 14C toluene in Pacific herring, Clupea harengus pallasi. Fishery Bulletin 75(3):633-636.
326	Squire, J. L., and S. E. Smith. 1977. Angler's guide to the United States Pacific coast: marine fish, fishing grounds and facilities. NOAA National Marine Fisheries Service, Seattle, Washington. 139 p.
725	Struhsaker, J. W. 1977. Effects of benzene (a toxic component of petroleum) on spawning Pacific herring, Clupea harengus pallasi. Fishery Bulletin 75(1):43-49.
400	Hobson, E. S. 1976. The rock wrasse, Halichoeres semicinctus, as a cleaner fish. California Fish and Game 62(1):73-78.
466	Hobson, E. S., and J. R. Chess. 1976. Trophic interactions among fishes and zooplankters near shore at Santa Catalina Island, California. Fishery Bulletin 74(3):567-598.
261	Kato, S., and J.E. Hardwick. 1976. The California squid fishery. In: Supplement 1 to the report of the Expert Consultation on Fishing for Squid and Other Cephalopods (Tokyo and Hakodate, Japan, 9-13 September 1975): Contributed papers, p. 107-127. FAO Fisheries Report 170 (supp. 1).
282	Korn, S., J. W. Struhsaker, and P. E. Benville. 1976. Effects of benzene on growth, fat content, and caloric content of striped bass (Morone saxatilis). Fishery Bulletin 74:694-698.
659	Korn, S., N. Hirsch, and J. W. Struhsaker. 1976. Uptake, distribution, and depuration of 14C-benzene in northern anchovy, Engraulis mordax, and striped bass, Morone saxatilis. Fishery Bulletin 74(3):545-551.
269	Li, H. W., and P. B. Adams. 1976. Three computer simulation games for the instruction of population dynamics. Fisheries 1(1):22.
476	Eldridge, M. B. 1975. Early larvae of the diamond turbot, Hypsopsetta guttulata. California Fish and Game 61:26-34.
433	Green, R. E. 1975. A preliminary list of fishes collected from Richardson Bay, California 1972-1973. California Fish and Game 61(2):104-106.
397	Hobson, E. S. 1975. Feeding patterns among tropical reef fishes. American Scientist 63(4):382-392.
398	Hobson, E. S. 1975. First California record of the serranid fish Anthias gordensis Wade. California Fish and Game 61(2):111-112.
399	Hobson, E. S. 1975. Hazardous marine animals. In: NOAA diving manual: diving for science and technology, chapter 15. U.S. National Oceanic and Atmospheric Administration (NOAA), Washington, DC.
341	Meyerhoff, R. D. 1975. Acute toxicity of benzene, a component of crude oil to juvenile striped bass, Morone saxatilis. Journal of the Fisheries Research Board of Canada 32:1864-1866.
180	Ueyanagi, S., and P. G. Wares. 1975. Synopsis of biological data on striped marlin, Tetrapturus audax (Philippi), 1887. In: Proceedings of the International Billfish Symposium (Kailua-Kona, Hawaii, 9-12 August 1972), Part 3: species synopses. NOAA Technical Report NMFS SSRF-675, Part 3, pp. 132-159.
281	Benville, P. E., and S. Korn. 1974. A simple apparatus for metering volatile liquids into water. Journal of the Fisheries Research Board of Canada 31(3):367-368.
449	Eldridge, M. B., and P. G. Wares. 1974. Some biological observations of billfishes taken in the eastern Pacific Ocean, 1967-1970. In: R. S. Shomura and F. Williams (eds.), Proceedings of the International Billfish Symposium (Kailua-Kona, Hawaii, 9-12 August 1972), Part 2: Review and contributed papers, p. 89-101. NOAA Technical Report NMFS SSRF-675.
395	Hobson, E. S. 1974. Feeding relationships of teleostean fishes on coral reefs in Kona, Hawaii. Fishery Bulletin 72(4):915-1031.
396	Hobson, E. S. 1974. The marine iguana. Oceans 7(2):48-49.
204	Hobson, E.S., and J.R. Chess. 1974. Preliminary observations of the diel feeding migrations of the atherinid fish Pranesus pinguis in the Marshall Islands. In: Indo-Pacific Fisheries Council, Proceedings, 15th Session (Wellington, New Zealand, 18-27 October 1972). Section III: Symposium on Coastal and High Seas Pelagic Resources, p. 192-194. IPFC Secretariat, FAO Regional Office for Asia and the Far East, Bangkok.
258	Kato, S. 1974. Development of the pelagic red crab (Galatheidae, Pleuroncodes planipes) fishery in the eastern Pacific Ocean. Marine Fisheries Review 36(10):1-9.
672	Korn, S., and R. Earnest. 1974. Acute toxicity of twenty insecticides to striped bass, Morone saxatilis. California Fish and Game 60(3):128-131.
450	Solorzano, Aurelio (translated by Maxwell B. Eldridge). 1974. The Mexican marine sport fisheries. Marine Fisheries Review 36(2):19-22.
451	Struhsaker, J. W., M. B. Eldridge, and T. Echeverria. 1974. Effects of benzene (a water-soluble component of crude oil) on eggs and larvae of Pacific herring and northern anchovy. In: F. J. Vernberg and W. B. Vernberg (eds.), Pollution and physiology of marine organisms, p. 253-284. Academic Press, New York.
457	Brocksen, R. W., and H. T. Bailey. 1973. Respiratory response of juvenile chinook salmon and striped bass exposed to benzene, a water-soluble component of crude oil. In: Proceedings of Joint Conference on Prevention and Control of Oil Spills (March 13-15, 1973, Washington, DC), p. 783-791. American Petroleum Institute, Washington, DC.
448	Eldridge, M. B., and W. M. Kaill. 1973. San Francisco Bay area's herring resource: a colorful past and a controversial future. Marine Fisheries Review 35(11):25-31.
393	Hobson, E. S. 1973. Diel feeding migrations in tropical reef fishes. Helgolander wissenschaftliche Meeresuntersuchungen 24:361-370.
465	Hobson, E. S., and J. R. Chess. 1973. Feeding oriented movements of the atherinid fish Pranesus pinguis at Majuro Atoll, Marshall Islands. Fishery Bulletin 71(3):777-786.
394	Hobson, Edmund S. 1973. Underwater science: an introduction to experiments by divers, edited by J.D. Woods and J.N. Lythgoe [book review]. Transactions of the American Fisheries Society 102(1):203-204.
205	Korn, S., and D. Macedo. 1973. Determination of fat content in fish with a nontoxic, noninflammable solvent. Journal of the Fisheries Research Board of Canada 30(12, pt. 1):1880-1881.
447	Eldridge, Maxwell B., and Charles F. Bryan. 1972. Larval fish survey of Humboldt Bay, California. NOAA Technical Report NMFS SSRF-665. 8 p.
407	Hobson, E. S. 1972. Activity of Hawaiian reef fishes during the evening and morning transitions between daylight and darkness. Fishery Bulletin 70(3):715-740.
408	Hobson, E. S. 1972. The survival of Guadalupe cardinalfish Apogon guadalupensis at San Clemente Island. California Fish and Game 58(1):68-69.
385	Hobson, Edmund S., and E. H. Chave. 1972. Hawaiian reef animals. University Press of Hawaii. 135 p.
257	Kato, S. 1972. Sea urchins: a new fishery develops in California. Marine Fisheries Review 34(9-10):23-30.
1198	Kato, Sus 1972. Narrative report [Trip to Japan]. National Marine Fisheries Service, Tiburon, California. 18 p.
1017	National Oceanic and Atmospheric Administration. 1972. The nation's fisheries [pamphlet]. U.S. Department of Commerce, National Oceanic and Atmospheric Administration, NOAA PA 71043/1972. (8 p.)
731	Ebersole, William C. 1971. Predicting disturbances to the near and offshore sedimentary regime from marine mining. Water, Air, and Soil Pollution 1(1):72-88.
216	Hobson, E. S. 1971. Cleaning symbiosis among California inshore fishes. Fishery Bulletin 69(3):491-523.
406	Hobson, Edmund S. 1971. Natural history of sharks, by Thomas H. Lineaweaver III and Richard H. Backus [book review]. Transactions of the American Fisheries Society 100(2):375.
384	Merrill, R. J., and E. S. Hobson. 1970. Field observations of Dendraster excentricus, a sand dollar of western North America. American Midland Naturalist 83(2):595-624.
403	Hobson, E. S. 1969. Comments on certain recent generalizations regarding cleaning symbiosis in fishes. Pacific Science 23(1):35-39.
404	Hobson, E. S. 1969. Possible advantages to the blenny Runula azalea in aggregating with the wrasse Thalassoma lucasanum in the tropical eastern Pacific. Copeia 1969(1):191-193.
172	Hobson, Edmund S. 1969. First California record of the Guadalupe cardinalfish, Apogon guadalupensis (Osburn and Nichols). California Fish and Game 55(2):149-151.
405	Hobson, Edmund S. 1969. Remarks on aquatic habits of the Galapagos marine iguana, including submergence times, cleaning symbiosis, and the shark threat. Copeia 1969(2):401-402.
383	Rosenblatt, R. H., and E. S. Hobson. 1969. Parrotfishes (Scaridae) of the eastern Pacific, with a generic rearrangement of the Scarinae. Copeia 1969(3):434-453.
418	Hobson, E. S. 1968. Coloration and activity of fishes, day and night. Underwater Naturalist 5(3):6-11.
402	Hobson, E. S. 1968. Predatory behavior of some shore fishes in the Gulf of California. U.S. Fish and Wildlife Service, Bureau of Sport Fisheries and Wildlife, Research Report 73. 92 p.
382	Hobson, E. S., and V. Walters. 1968. First eastern Pacific record of Canthigaster amboinensis, and Indo-West Pacific pufferfish. Copeia 1968(4):861-862.
417	Hobson, E. S. 1966. Visual orientation and feeding in seals and sea lions. Nature 210(5033):326-327.
381	Stephens, J. S., E. S. Hobson, and R. K. Johnson. 1966. Notes on distribution, behavior, and morphological variation in some chaenopsid fishes from the tropical eastern Pacific, with descriptions of two new species, Acanthemblemaria castroi and Coralliozetus springeri. Copeia 1966(3):424-438.
416	Hobson, E. S. 1965. A visit with el barbero. Underwater Naturalist 3(3):5-10.
413	Hobson, E. S. 1965. Forests beneath the sea. Animals 7(9):506-511.
415	Hobson, E. S. 1965. Spawning in the Pacific coast squid, Loligo opalescens. Underwater Naturalist 3(3):20-21.
412	Hobson, Edmund S. 1965. Diurnal-nocturnal activity of some inshore fishes in the Gulf of California. Copeia 1965(3):291-302.
414	Hobson, Edmund S. 1965. Observations on diving in the Galapagos marine iguana, Amblyrhynchus cristatus (Bell). Copeia 1965(2):249-250.
409	Hobson, E. S. 1964. Sharks increasing visual field. Underwater Naturalist 2(3):29.
411	Hobson, E. S. 1963. Selective feeding by the gafftopsail pompano, Trachinotus rhodopus (Gill), in mixed schools of herring and anchovies in the Gulf of California. Copeia 1963(3):595-596.

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